A human nucleobase transporter-like cDNA (SLC23A1): member of a transporter family conserved from bacteria to mammals

Genomics. 1999 Jul 1;59(1):18-23. doi: 10.1006/geno.1999.5847.

Abstract

A family of related polytopic membrane proteins that mediate the transport of nucleobases has been extended to Homo sapiens by the cloning of a full-length human cDNA that encodes a nucleobase transporter-like protein. The protein is predicted to contain 11-14 transmembrane-spanning regions, exhibits 20-28% overall sequence identity to fungal and bacterial transporters, and contains a conserved signature motif found in this family. Fluorescence in situ hybridization localized the gene (HGMW-approved symbol SLC23A1) to human chromosome 20p13. Human nucleobase transporter-like mRNA was present in all tissues examined, with lower levels found in heart, skeletal muscle, and ovary. Expression of the 60-kDa cDNA-encoded protein was demonstrated by an in vitro transcription-translation approach. The identification of this nucleobase transporter-like protein will allow the further elucidation of the interaction of human cells with physiological nucleobases and pharmacologically important drugs such as 5-F-uracil, dideoxynucleosides, and acyclic nucleosides.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Bacteria / genetics
  • Base Sequence
  • Carrier Proteins / genetics*
  • Chromosome Banding
  • Chromosome Mapping
  • Chromosomes, Human, Pair 20 / genetics
  • Conserved Sequence
  • DNA, Complementary / chemistry
  • DNA, Complementary / genetics*
  • Female
  • Humans
  • In Situ Hybridization, Fluorescence
  • Male
  • Mammals / genetics
  • Membrane Proteins / genetics*
  • Molecular Sequence Data
  • Nucleoside Transport Proteins
  • Organic Anion Transporters, Sodium-Dependent*
  • Protein Biosynthesis
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Sodium-Coupled Vitamin C Transporters
  • Symporters*
  • Tissue Distribution
  • Transcription, Genetic

Substances

  • Carrier Proteins
  • DNA, Complementary
  • Membrane Proteins
  • Nucleoside Transport Proteins
  • Organic Anion Transporters, Sodium-Dependent
  • RNA, Messenger
  • SLC23A1 protein, human
  • Sodium-Coupled Vitamin C Transporters
  • Symporters

Associated data

  • GENBANK/AF092511