Arthrobacter flavus sp. nov., a psychrophilic bacterium isolated from a pond in McMurdo Dry Valley, Antarctica

Int J Syst Evol Microbiol. 2000 Jul:50 Pt 4:1553-1561. doi: 10.1099/00207713-50-4-1553.

Abstract

CMS 19YT, a psychrophilic bacterium, was isolated from a cyanobacterial mat sample from a pond in Antarctica and was characterized taxonomically. The bacterium was aerobic, gram-positive, non-spore-forming, non-motile, exhibited a rod-coccus growth cycle and produced a yellow pigment that was insoluble in water but soluble in methanol. No growth factors were required and it was able to grow between 5 and 30 degrees C, between pH 6 and pH 9 and tolerated up to 11.5% NaCl. The cell wall peptidoglycan was Lys-Thr-Ala3 (the A3alpha variant) and the major menaquinone was MK-9(H2). The G+C content of the DNA was 64+/-2 mol%. The 16S rDNA analysis indicated that CMS 19YT is closely related to group I Arthrobacter species and showed highest sequence similarity (97.91%) with Arthrobacter agilis. Furthermore, DNA-DNA. hybridization studies also indicated 77% homology between CMS 19YT and A. agilis. It differed from A. agilis, however, in that it was psychrophilic, non-motile, yellow in colour, exhibited a rod-coccus growth cycle, had a higher degree of tolerance to NaCl and was oxidase- and urease-negative and lipase-positive. In addition, it had a distinct fatty acid composition compared to that of A. agilis: the predominant fatty acids were C15:0, anteiso-C15:0, C16:0, iso-C16:0, C17:0, anteiso-C17:0 and C18:0. It is proposed, therefore, that CMS 19YT should be placed in the genus Arthrobacter as a new species, i.e. Arthrobacter flavus sp. nov. The type strain of A. flavus is CMS 19YT (= MTCC 3476T).

MeSH terms

  • Antarctic Regions
  • Arthrobacter / chemistry
  • Arthrobacter / classification*
  • Arthrobacter / physiology
  • Base Composition
  • Cell Wall / chemistry
  • Culture Media
  • DNA, Bacterial / analysis
  • DNA, Bacterial / chemistry
  • DNA, Ribosomal / analysis
  • Fatty Acids
  • Fresh Water / microbiology
  • Hydrogen-Ion Concentration
  • Lipase
  • Molecular Sequence Data
  • Peptidoglycan
  • Phylogeny
  • Pigments, Biological / metabolism
  • RNA, Ribosomal, 16S / genetics
  • Sodium Chloride
  • Temperature
  • Vitamin K
  • Water Microbiology*

Substances

  • Culture Media
  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Peptidoglycan
  • Pigments, Biological
  • RNA, Ribosomal, 16S
  • Vitamin K
  • Sodium Chloride
  • Lipase

Associated data

  • GENBANK/AJ242532