PrimeArray: genome-scale primer design for DNA-microarray construction

G Raddatz; M Dehio; T F Meyer; C Dehio

doi:10.1093/bioinformatics/17.1.98

PrimeArray: genome-scale primer design for DNA-microarray construction

Bioinformatics. 2001 Jan;17(1):98-9. doi: 10.1093/bioinformatics/17.1.98.

Authors

G Raddatz¹, M Dehio, T F Meyer, C Dehio

Affiliation

¹ Max-Planck-Institut für Biologie, Abteilung Infektionsbiologie, Spemannstrasse 34, 72076 Tübingen, Germany.

PMID: 11222267
DOI: 10.1093/bioinformatics/17.1.98

Abstract

PrimeArray is a Windows program that computes oligonuceotide primer pairs for genome-scale gene amplification by the Polymerase Chain Reaction (PCR). The program supports the automated extraction of coding sequences (CDS) from various input-file formats and allows highly automated primer pair-optimization.

MeSH terms

Base Sequence
Computational Biology
Computer-Aided Design
DNA Primers / genetics*
Drug Design
Helicobacter pylori / genetics
Oligonucleotide Array Sequence Analysis / methods*
Oligonucleotide Array Sequence Analysis / statistics & numerical data
Polymerase Chain Reaction
Software*

Substances

DNA Primers