A novel mRNA-decapping activity in HeLa cytoplasmic extracts is regulated by AU-rich elements

EMBO J. 2001 Mar 1;20(5):1134-43. doi: 10.1093/emboj/20.5.1134.

Abstract

While decapping plays a major role in mRNA turnover in yeast, biochemical evidence for a similar activity in mammalian cells has been elusive. We have now identified a decapping activity in HeLa cytoplasmic extracts that releases (7me)GDP from capped transcripts. Decapping is activated in extracts by the addition of (7me)GpppG, which specifically sequesters cap-binding proteins such as eIF4E and the deadenylase DAN/PARN. Similar to in vivo observations, the presence of a poly(A) tail represses decapping of RNAs in vitro in a poly(A)-binding protein-dependent fashion. AU-rich elements (AREs), which act as regulators of mRNA stability in vivo, are potent stimulators of decapping in vitro. The stimulation of decapping by AREs requires sequence-specific ARE-binding proteins. These data suggest that cap recognition and decapping play key roles in mediating mRNA turnover in mammalian cells.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • AT Rich Sequence / genetics
  • Binding, Competitive
  • Cell Extracts
  • Cytoplasm / metabolism*
  • Dinucleoside Phosphates / metabolism
  • Eukaryotic Initiation Factor-4E
  • Guanosine Diphosphate / analogs & derivatives
  • Guanosine Diphosphate / metabolism
  • HeLa Cells
  • Humans
  • Models, Genetic
  • Peptide Initiation Factors / metabolism
  • Poly A / genetics
  • Poly A / metabolism
  • Poly(A)-Binding Proteins
  • RNA Caps / genetics*
  • RNA Stability / genetics
  • RNA, Messenger / genetics*
  • RNA, Messenger / metabolism*
  • RNA-Binding Proteins / metabolism
  • Regulatory Sequences, Nucleic Acid / genetics*
  • Saccharomyces cerevisiae

Substances

  • Cell Extracts
  • Dinucleoside Phosphates
  • Eukaryotic Initiation Factor-4E
  • Peptide Initiation Factors
  • Poly(A)-Binding Proteins
  • RNA Caps
  • RNA, Messenger
  • RNA-Binding Proteins
  • 7-methylguanosine 5'-diphosphate
  • Guanosine Diphosphate
  • Poly A
  • 7-methyl-diguanosine triphosphate