Amino acid residues before the hydrophobic region which are critical for membrane translocation of the N-terminal domain of synaptotagmin II

FEBS Lett. 2001 Nov 2;507(3):341-5. doi: 10.1016/s0014-5793(01)03000-9.

Abstract

We examined the fine structure of the type I signal-anchor sequence of synaptotagmin II, which has a 60-residue N-terminal domain followed by a hydrophobic region (H-region), focusing on the hinge region between the N-terminal and the H-regions. It was found that the charged or highly polar residues support the translocation of the N-terminal domain through the endoplasmic reticulum membrane at specific positions in the hinge. The residue requirement correlated with the turn propensity scale for transmembranes. It is suggested that a certain conformation, likely helical hairpin, in the hinge is critical for N-terminal domain translocation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Aspartic Acid / chemistry
  • Glycosylation
  • Intracellular Membranes / metabolism*
  • Lysine / chemistry
  • Molecular Sequence Data
  • Mutation
  • Nerve Tissue Proteins / chemistry*
  • Nerve Tissue Proteins / genetics
  • Nerve Tissue Proteins / metabolism*
  • Proline / chemistry
  • Protein Conformation
  • Protein Structure, Tertiary
  • Protein Transport
  • Synaptotagmin II

Substances

  • Nerve Tissue Proteins
  • Synaptotagmin II
  • Aspartic Acid
  • Proline
  • Lysine