Molecular identification of family 38 alpha-mannosidase of Bacillus sp. strain GL1, responsible for complete depolymerization of xanthan

Appl Environ Microbiol. 2002 Jun;68(6):2731-6. doi: 10.1128/AEM.68.6.2731-2736.2002.

Abstract

When cells of Bacillus sp. strain GL1 were grown in a medium containing xanthan as a carbon source, alpha-mannosidase exhibiting activity toward p-nitrophenyl-alpha-D-mannopyranoside (pNP-alpha-D-Man) was produced intracellularly. The 350-kDa alpha-mannosidase purified from a cell extract of the bacterium was a trimer comprising three identical subunits, each with a molecular mass of 110 kDa. The enzyme hydrolyzed pNP-alpha-D-Man (Km = 0.49 mM) and D-mannosyl-(alpha-1,3)-D-glucose most efficiently at pH 7.5 to 9.0, indicating that the enzyme catalyzes the last step of the xanthan depolymerization pathway of Bacillus sp. strain GL1. The gene for alpha-mannosidase cloned most by using N-terminal amino acid sequence information contained an open reading frame (3,144 bp) capable of coding for a polypeptide with a molecular weight of 119,239. The deduced amino acid sequence showed homology with the amino acid sequences of alpha-mannosidases belonging to glycoside hydrolase family 38.

MeSH terms

  • Amino Acid Sequence
  • Bacillus / enzymology*
  • Bacillus / genetics
  • Cloning, Molecular
  • DNA, Bacterial / analysis
  • Hydrogen-Ion Concentration
  • Mannosidases / classification
  • Mannosidases / genetics
  • Mannosidases / isolation & purification
  • Mannosidases / metabolism*
  • Metals / metabolism
  • Molecular Weight
  • Polysaccharides, Bacterial / metabolism*
  • Sequence Analysis, Protein
  • Substrate Specificity
  • Temperature

Substances

  • DNA, Bacterial
  • Metals
  • Polysaccharides, Bacterial
  • Mannosidases
  • xanthan gum