Sequencing and expression of the gene encoding the Clostridium stercorarium beta-xylosidase Xyl43B in Escherichia coli

Biosci Biotechnol Biochem. 2004 Mar;68(3):609-14. doi: 10.1271/bbb.68.609.

Abstract

The Clostridium stercorarium F-9 xyl43B gene encoding the beta-xylosidase Xyl43B consists of an open reading frame of 1,491 nucleotides that encodes a putative protein, classified in family 43, of 497 amino acids with a predicted molecular weight of 56,355. The deduced amino acid sequence of Xyl43B has sequence similarity with beta-xylosidases from Bacteriodes thetaiotaomicron (57% sequence identity), Prevotella ruminicola (45%), Streptomyces coelicolor (40%), and Clostridium acetobutylicum (36%), all of which have been classified in family 43 of the glycoside hydrolases. Xyl43B was purified from a recombinant Escherichia coli and characterized. The optimum pH of the purified enzyme was 3.5 and it was stable over pH from 3.0 to 8.0. Its optimum temperature was 80 degrees C and it showed thermostability in the temperature range from 50 to 70 degrees C. Xyl43B had a K(m) of 6.2 mM and a V(max) of 15 micromol min(-1) mg(-1) for p-nitrophenyl-beta-D-xylopyranoside.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Clostridium / enzymology*
  • Clostridium / genetics
  • Enzyme Stability
  • Escherichia coli / enzymology
  • Escherichia coli / genetics
  • Gene Expression
  • Hydrogen-Ion Concentration
  • Molecular Sequence Data
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Temperature
  • Xylosidases / genetics*
  • Xylosidases / isolation & purification
  • Xylosidases / metabolism*

Substances

  • Xylosidases
  • exo-1,4-beta-D-xylosidase