Tuna cytochrome c at 2.0 A resolution. II. Ferrocytochrome structure analysis

J Biol Chem. 1977 Jan 25;252(2):776-85.

Abstract

The x-ray crystal structure analysis of tuna ferrocytochrome c has been extended from 2.45 to 2.0 A resolution. The overall folding is unchanged and is the same as has been reported for tuna ferricytochrome c (Swanson R., Trus, B.L., Mandel, N., Mandel, G., Kallai, O.B., and Dickerson, R.E. (1977) J. Biol. Chem. 252, 759-755). No significant structural differences are observed between oxidation states. Difference map studies using reoxidized crystals of ferrocytochrome c confirm the absence of a conformation change. A detailed analysis of hydrogen bonding shows the presence of six beta or 310 bends of type II with obligatory glycines in the 3rd residue position. This explains 6 of the 10 nearly invariant glycines in the molecule. Close packing contacts account for three more, and only the invariant glycine 1 remains a mystery.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Binding Sites
  • Cytochrome c Group*
  • Fourier Analysis
  • Mercury
  • Models, Molecular
  • Myocardium / enzymology
  • Platinum
  • Protein Binding
  • Protein Conformation
  • Tuna
  • X-Ray Diffraction

Substances

  • Cytochrome c Group
  • Platinum
  • Mercury