Pelagibius litoralis gen. nov., sp. nov., a marine bacterium in the family Rhodospirillaceae isolated from coastal seawater

Int J Syst Evol Microbiol. 2009 Apr;59(Pt 4):818-23. doi: 10.1099/ijs.0.002774-0.

Abstract

A Gram-negative, strictly aerobic, slightly curved rod-shaped bacterial strain, designated CL-UU02(T), was isolated from coastal seawater off the east coast of Korea. 16S rRNA gene sequence analysis revealed a clear affiliation of this novel strain with the family Rhodospirillaceae. Strain CL-UU02(T) formed a robust cluster with the type strains of species of the genus Rhodovibrio at 16S rRNA gene sequence similarity levels of 89.9-90.4 %. Strain CL-UU02(T) shared no more than 89 % 16S rRNA gene sequence similarity with the type strains of other species in the family Rhodospirillaceae. Strain CL-UU02(T) was able to grow in the presence of 2-6 % sea salts, and grew optimally at 28-30 degrees C and pH 7-8. The DNA G+C content of strain CL-UU02(T) was 66.3 mol%. On the basis of phylogenetic analyses and chemotaxonomic and physiological data, strain CL-UU02(T) is considered to represent a novel species of a new genus in the family Rhodospirillaceae, for which the name Pelagibius litoralis gen. nov., sp. nov. is proposed. The type strain of Pelagibius litoralis is CL-UU02(T) (=KCCM 42323(T)=JCM 15426(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anaerobiosis
  • Bacterial Typing Techniques
  • Base Composition
  • Cluster Analysis
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Korea
  • Molecular Sequence Data
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Rhodospirillaceae / classification*
  • Rhodospirillaceae / genetics
  • Rhodospirillaceae / isolation & purification*
  • Rhodospirillaceae / physiology
  • Seawater / microbiology*
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid
  • Sodium Chloride / metabolism
  • Temperature

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Ribosomal, 16S
  • Sodium Chloride

Associated data

  • GENBANK/DQ401091