Torulaspora quercuum sp. nov. and Candida pseudohumilis sp. nov., novel yeasts from human and forest habitats

FEMS Yeast Res. 2009 Dec;9(8):1322-6. doi: 10.1111/j.1567-1364.2009.00567.x. Epub 2009 Aug 18.

Abstract

Strains XZ-46A, XZ-105, XZ-129 and XZ-281(T) isolated from the oral cavities of healthy Tibetan volunteers were revealed to represent two novel ascomycetous yeast species by molecular taxonomic characterizations. Strain XZ-281(T) was most closely related to Candida humilis, but differed from the type strain of the species by eight (1.2%) substitutions in the 26S rRNA gene D1/D2 domain and by >100 (>20%) mismatches in the internal transcribed spacer (ITS) region. Strains XZ-46A, XZ-105 and XZ-129 had identical or similar D1/D2 and ITS sequences with each other and with strain 17YF(T) isolated from a leaf of an oak tree (Quercus sp.). The closest relative of this group was Torulaspora microellipsoides. They differed from the type strain of the species by five (0.9%) substitutions in the D1/D2 domain and >70 (>15%) mismatches in the ITS region. A sexual state was observed in strain 17YF(T), but not in the other four oral strains. An anamorphic name Candida pseudohumilis sp. nov. is proposed for strain XZ-281(T) (=AS 2.3956(T)=CBS 11404(T)) and a teleomorphic name Torulaspora quercuum sp. nov. is proposed for strain 17YF(T) (=AS 2.3768(T)=CBS 11403(T)) and the other three oral strains.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Candida / classification*
  • Candida / cytology
  • Candida / genetics
  • Candida / isolation & purification*
  • Cluster Analysis
  • DNA, Fungal / chemistry
  • DNA, Fungal / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • DNA, Ribosomal Spacer / chemistry
  • DNA, Ribosomal Spacer / genetics
  • Ecosystem
  • Genes, rRNA
  • Humans
  • Male
  • Microscopy
  • Molecular Sequence Data
  • Mouth / microbiology*
  • Phylogeny
  • Quercus / microbiology*
  • RNA, Fungal / genetics
  • RNA, Ribosomal, 28S / genetics
  • Sequence Analysis, DNA
  • Tibet
  • Torulaspora / classification*
  • Torulaspora / cytology
  • Torulaspora / genetics
  • Torulaspora / isolation & purification*
  • Trees

Substances

  • DNA, Fungal
  • DNA, Ribosomal
  • DNA, Ribosomal Spacer
  • RNA, Fungal
  • RNA, Ribosomal, 28S

Associated data

  • GENBANK/FJ888524
  • GENBANK/FJ888525
  • GENBANK/FJ888526