Formation of the iron-oxo hydroxylating species in the catalytic cycle of aromatic amino acid hydroxylases

Chemistry. 2011 Mar 21;17(13):3746-58. doi: 10.1002/chem.201002910. Epub 2011 Feb 24.

Abstract

The first part of the catalytic cycle of the pterin-dependent, dioxygen-using nonheme-iron aromatic amino acid hydroxylases, leading to the Fe(IV)=O hydroxylating intermediate, has been investigated by means of density functional theory. The starting structure in the present investigation is the water-free Fe-O(2) complex cluster model that represents the catalytically competent form of the enzymes. A model for this structure was obtained in a previous study of water-ligand dissociation from the hexacoordinate model complex of the X-ray crystal structure of the catalytic domain of phenylalanine hydroxylase in complex with the cofactor (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH(4)) (PAH-Fe(II)-BH(4)). The O-O bond rupture and two-electron oxidation of the cofactor are found to take place via a Fe-O-O-BH(4) bridge structure that is formed in consecutive radical reactions involving a superoxide ion, O(2)(-). The overall effective free-energy barrier to formation of the Fe(IV)=O species is calculated to be 13.9 kcal mol(-1), less than 2 kcal mol(-1) lower than that derived from experiment. The rate-limiting step is associated with a one-electron transfer from the cofactor to dioxygen, whereas the spin inversion needed to arrive at the quintet state in which the O-O bond cleavage is finalized, essentially proceeds without activation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acids, Aromatic / chemistry*
  • Amino Acids, Aromatic / metabolism
  • Biopterins / analogs & derivatives*
  • Biopterins / chemistry
  • Biopterins / metabolism
  • Catalysis
  • Coenzymes / chemistry*
  • Coenzymes / metabolism
  • Crystallography, X-Ray
  • Ferrous Compounds / chemistry*
  • Ferrous Compounds / metabolism
  • Hydroxylation
  • Iron / chemistry*
  • Ligands
  • Mixed Function Oxygenases / chemistry*
  • Mixed Function Oxygenases / metabolism
  • Molecular Structure
  • Oxidation-Reduction
  • Pterins / chemistry*

Substances

  • Amino Acids, Aromatic
  • Coenzymes
  • Ferrous Compounds
  • Ligands
  • Pterins
  • Biopterins
  • Iron
  • Mixed Function Oxygenases
  • sapropterin