Tentative identification of RNA-dependent RNA polymerases of dsRNA viruses and their relationship to positive strand RNA viral polymerases

FEBS Lett. 1989 Jul 31;252(1-2):42-6. doi: 10.1016/0014-5793(89)80886-5.

Abstract

Amino acid sequence stretches similar to the four most conserved segments of positive strand RNA viral RNA-dependent RNA polymerases have been identified in proteins of four dsRNA viruses belonging to three families, i.e. P2 protein of bacteriophage phi 6 (Cystoviridae), RNA 2 product of infectious bursa disease virus (Birnaviridae), lambda 3 protein of reovirus, and VP1 of bluetongue virus (Reoviridae). High statistical significance of the observed similarity was demonstrated, allowing identification of these proteins as likely candidates for RNA-dependent RNA polymerases. Based on these observations, and on the previously reported sequence similarity between the RNA polymerases of a yeast dsRNA virus and those of positive strand RNA viruses, a possible evolutionary relationship between the two virus classes is discussed.

Publication types

  • Comparative Study

MeSH terms

  • Amino Acid Sequence
  • Binding Sites
  • DNA-Directed RNA Polymerases / metabolism*
  • Molecular Sequence Data
  • RNA Nucleotidyltransferases / metabolism*
  • RNA Viruses / enzymology*
  • RNA, Double-Stranded / metabolism*
  • RNA-Dependent RNA Polymerase / metabolism*

Substances

  • RNA, Double-Stranded
  • RNA Nucleotidyltransferases
  • RNA-Dependent RNA Polymerase
  • DNA-Directed RNA Polymerases