Protein-directed ribosomal frameshifting temporally regulates gene expression

Nat Commun. 2017 Jun 8:8:15582. doi: 10.1038/ncomms15582.

Abstract

Programmed -1 ribosomal frameshifting is a mechanism of gene expression, whereby specific signals within messenger RNAs direct a proportion of translating ribosomes to shift -1 nt and continue translating in the new reading frame. Such frameshifting normally occurs at a set ratio and is utilized in the expression of many viral genes and a number of cellular genes. An open question is whether proteins might function as trans-acting switches to turn frameshifting on or off in response to cellular conditions. Here we show that frameshifting in a model RNA virus, encephalomyocarditis virus, is trans-activated by viral protein 2A. As a result, the frameshifting efficiency increases from 0 to 70% (one of the highest known in a mammalian system) over the course of infection, temporally regulating the expression levels of the viral structural and enzymatic proteins.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Line
  • Encephalomyocarditis virus / genetics
  • Encephalomyocarditis virus / metabolism*
  • Frameshifting, Ribosomal / genetics*
  • Gene Expression Regulation, Viral / genetics*
  • Inverted Repeat Sequences / genetics*
  • Mesocricetus
  • Nucleic Acid Conformation
  • Open Reading Frames
  • Protein Biosynthesis / genetics*
  • RNA, Messenger / genetics
  • RNA, Viral / biosynthesis
  • RNA, Viral / genetics
  • Ribosomes / metabolism
  • Viral Proteins / genetics*

Substances

  • RNA, Messenger
  • RNA, Viral
  • Viral Proteins
  • virus protein 2A