Genetic Variants in HSD17B3, SMAD3, and IPO11 Impact Circulating Lipids in Response to Fenofibrate in Individuals With Type 2 Diabetes

Clin Pharmacol Ther. 2018 Apr;103(4):712-721. doi: 10.1002/cpt.798. Epub 2017 Nov 3.

Abstract

Individuals with type 2 diabetes (T2D) and dyslipidemia are at an increased risk of cardiovascular disease. Fibrates are a class of drugs prescribed to treat dyslipidemia, but variation in response has been observed. To evaluate common and rare genetic variants that impact lipid responses to fenofibrate in statin-treated patients with T2D, we examined lipid changes in response to fenofibrate therapy using a genomewide association study (GWAS). Associations were followed-up using gene expression studies in mice. Common variants in SMAD3 and IPO11 were marginally associated with lipid changes in black subjects (P < 5 × 10-6 ). Rare variant and gene expression changes were assessed using a false discovery rate approach. AKR7A3 and HSD17B13 were associated with lipid changes in white subjects (q < 0.2). Mice fed fenofibrate displayed reductions in Hsd17b13 gene expression (q < 0.1). Associations of variants in SMAD3, IPO11, and HSD17B13, with gene expression changes in mice indicate that transforming growth factor-beta (TGF-β) and NRF2 signaling pathways may influence fenofibrate effects on dyslipidemia in patients with T2D.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aldehyde Reductase / genetics*
  • Animals
  • Diabetes Mellitus, Type 2* / complications
  • Diabetes Mellitus, Type 2* / genetics
  • Diabetes Mellitus, Type 2* / metabolism
  • Dyslipidemias* / blood
  • Dyslipidemias* / complications
  • Dyslipidemias* / drug therapy
  • Dyslipidemias* / genetics
  • Female
  • Fenofibrate* / administration & dosage
  • Fenofibrate* / pharmacokinetics
  • Gene Expression Profiling / methods
  • Genome-Wide Association Study
  • Humans
  • Hypolipidemic Agents / administration & dosage
  • Hypolipidemic Agents / pharmacokinetics
  • Lipid Metabolism* / drug effects
  • Lipid Metabolism* / genetics
  • Male
  • Mice
  • Middle Aged
  • Pharmacogenomic Testing / methods
  • Signal Transduction / drug effects
  • Smad3 Protein / genetics*
  • beta Karyopherins / genetics*

Substances

  • Hypolipidemic Agents
  • IPO11 protein, human
  • SMAD3 protein, human
  • Smad3 Protein
  • beta Karyopherins
  • AKR7A3 protein, human
  • Aldehyde Reductase
  • Fenofibrate