Paenibacillus maysiensis sp. nov., a Nitrogen-Fixing Species Isolated from the Rhizosphere Soil of Maize

Curr Microbiol. 2018 Oct;75(10):1267-1273. doi: 10.1007/s00284-018-1519-8. Epub 2018 Jun 8.

Abstract

A novel bacterium SX-49T with nitrogen-fixing capability was isolated from the rhizosphere soil of maize. Phylogenetic analysis of nifH gene fragment and 16S rRNA gene sequence revealed that the strain SX-49T is a member of the genus Paenibacillus. Values of 16S rRNA gene sequence similarity were highest between SX-49T and P. jamilae DSM 13815T (97.0%), P. brasiliensis DSM 14914T (97.8%), P. polymyxa DSM 36T (97.5%), and P. terrae DSM 15891T (98.8%). The similarity between SX-49T and other Paenibacillus species was < 97.0%. DNA-DNA hybridization values between strain SX-49T and the four type strains were P. jamilae DSM 13815T: 40.6%, P. brasiliensis DSM 14914T: 27.9%, P. polymyxa DSM 36T: 29.2%, and P. terrae DSM 15891T: 66.4%. The DNA G+C content of SX-49T was 46.4 mol%. The predominant fatty acids were anteiso-C15:0, C16:0 and iso-C16:0. The predominant isoprenoid quinone was MK-7. The genome contains 5628 putative protein-coding sequences (CDS), 6 rRNAs and 56 tRNAs. The phenotypic and genotypic characteristics, DNA-DNA relatedness, and genome features suggest that SX-49T represents a novel species of the genus Paenibacillus, and the name Paenibacillus maysiensis sp. nov. is proposed.

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • Fatty Acids / chemistry
  • Fatty Acids / metabolism
  • Nitrogen Fixation*
  • Paenibacillus / classification
  • Paenibacillus / genetics
  • Paenibacillus / isolation & purification*
  • Paenibacillus / metabolism
  • Phylogeny
  • Plant Roots / growth & development
  • Plant Roots / microbiology
  • RNA, Ribosomal, 16S
  • Rhizosphere
  • Soil Microbiology*
  • Zea mays / growth & development
  • Zea mays / microbiology

Substances

  • Fatty Acids
  • RNA, Ribosomal, 16S