Lighting Up Live-Cell and In Vivo Central Carbon Metabolism with Genetically Encoded Fluorescent Sensors

Annu Rev Anal Chem (Palo Alto Calif). 2020 Jun 12;13(1):293-314. doi: 10.1146/annurev-anchem-091619-091306. Epub 2020 Mar 2.

Abstract

As the core component of cell metabolism, central carbon metabolism, consisting of glycolysis, the pentose phosphate pathway, and the tricarboxylic acid cycle converts nutrients into metabolic precursors for biomass and energy to sustain the life of virtually all extant species. The metabolite levels or distributions in central carbon metabolism often change dynamically with cell fates, development, and disease progression. However, traditional biochemical methods require cell lysis, making it challenging to obtain spatiotemporal information about metabolites in living cells and in vivo. Genetically encoded fluorescent sensors allow the rapid, sensitive, specific, and real-time readout of metabolite dynamics in living organisms, thereby offering the potential to fill the gap in current techniques. In this review, we introduce recent progress made in the development of genetically encoded fluorescent sensors for central carbon metabolism and discuss their advantages, disadvantages, and applications. Moreover, several future directions of metabolite sensors are also proposed.

Keywords: central carbon metabolism; fluorescence imaging; genetically encoded fluorescent sensors; real-time monitoring.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Biosensing Techniques
  • Carbon / metabolism*
  • Luminescent Proteins / genetics
  • Luminescent Proteins / metabolism*
  • Optical Imaging

Substances

  • Luminescent Proteins
  • Carbon