A Noninvasive Urine Metabolome Panel as Potential Biomarkers for Diagnosis of T Cell-Mediated Renal Transplant Rejection

OMICS. 2020 Mar;24(3):140-147. doi: 10.1089/omi.2019.0158.

Abstract

Acute T cell-mediated rejection (TCMR) is a major complication after renal transplantation. TCMR diagnosis is very challenging and currently depends on invasive renal biopsy and nonspecific markers such as serum creatinine. A noninvasive metabolomics panel could allow early diagnosis and improved accuracy and specificity. We report, in this study, on urine metabolome changes in renal transplant recipients diagnosed with TCMR, with a view to future metabolomics-based diagnostics in transplant medicine. We performed urine metabolomic analyses in three study groups: (1) 7 kidney transplant recipients with acute TCMR, (2) 15 kidney transplant recipients without rejection but with impaired kidney function, and (3) 6 kidney transplant recipients with stable renal function, using 1H-nuclear magnetic resonance. Multivariate modeling of metabolites suggested a diagnostic panel where the diagnostic accuracy of each metabolite was calculated by receiver operating characteristic curve analysis. The impaired metabolic pathways associated with TCMR were identified by pathway analysis. In all, a panel of nine differential metabolites encompassing nicotinamide adenine dinucleotide, 1-methylnicotinamide, cholesterol sulfate, gamma-aminobutyric acid (GABA), nicotinic acid, nicotinamide adenine dinucleotide phosphate, proline, spermidine, and alpha-hydroxyhippuric acid were identified as novel potential metabolite biomarkers of TCMR. Proline, spermidine, and GABA had the highest area under the curve (>0.7) and were overrepresented in the TCMR group. Nicotinate and nicotinamide metabolism was the most important pathway in TCMR. These findings call for clinical validation in larger study samples and suggest that urinary metabolomics warrants future consideration as a noninvasive research tool for TCMR diagnostic innovation.

Keywords: biomarkers; kidney disease; nuclear magnetic resonance; transplant medicine; transplant rejection; urinary metabolomics.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acute Disease
  • Adenosine Diphosphate / urine
  • Adult
  • Biomarkers / urine
  • Cholesterol Esters / urine
  • Cross-Sectional Studies
  • Female
  • Graft Rejection / diagnosis
  • Graft Rejection / immunology
  • Graft Rejection / pathology
  • Graft Rejection / urine*
  • Graft Survival / immunology
  • Hippurates / urine
  • Humans
  • Kidney Transplantation*
  • Male
  • Metabolome / immunology*
  • Middle Aged
  • NAD / urine
  • Niacin / urine
  • Niacinamide / analogs & derivatives
  • Niacinamide / urine
  • Proline / urine*
  • ROC Curve
  • Renal Insufficiency, Chronic / immunology
  • Renal Insufficiency, Chronic / surgery
  • Spermidine / urine*
  • T-Lymphocytes
  • gamma-Aminobutyric Acid / urine*

Substances

  • Biomarkers
  • Cholesterol Esters
  • Hippurates
  • alpha-hydroxyhippuric acid
  • NAD
  • Niacinamide
  • Niacin
  • gamma-Aminobutyric Acid
  • Adenosine Diphosphate
  • Proline
  • cholesteryl sulfate
  • Spermidine
  • N(1)-methylnicotinamide