SUMOylated PRC1 controls histone H3.3 deposition and genome integrity of embryonic heterochromatin

EMBO J. 2020 Jul 1;39(13):e103697. doi: 10.15252/embj.2019103697. Epub 2020 May 12.

Abstract

Chromatin integrity is essential for cellular homeostasis. Polycomb group proteins modulate chromatin states and transcriptionally repress developmental genes to maintain cell identity. They also repress repetitive sequences such as major satellites and constitute an alternative state of pericentromeric constitutive heterochromatin at paternal chromosomes (pat-PCH) in mouse pre-implantation embryos. Remarkably, pat-PCH contains the histone H3.3 variant, which is absent from canonical PCH at maternal chromosomes, which is marked by histone H3 lysine 9 trimethylation (H3K9me3), HP1, and ATRX proteins. Here, we show that SUMO2-modified CBX2-containing Polycomb Repressive Complex 1 (PRC1) recruits the H3.3-specific chaperone DAXX to pat-PCH, enabling H3.3 incorporation at these loci. Deficiency of Daxx or PRC1 components Ring1 and Rnf2 abrogates H3.3 incorporation, induces chromatin decompaction and breakage at PCH of exclusively paternal chromosomes, and causes their mis-segregation. Complementation assays show that DAXX-mediated H3.3 deposition is required for chromosome stability in early embryos. DAXX also regulates repression of PRC1 target genes during oogenesis and early embryogenesis. The study identifies a novel critical role for Polycomb in ensuring heterochromatin integrity and chromosome stability in mouse early development.

Keywords: PRC1; SUMOylation; chromosome stability; constitutive heterochromatin; histone variant.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Co-Repressor Proteins / genetics
  • Co-Repressor Proteins / metabolism
  • Embryo, Mammalian / embryology*
  • Female
  • Genomic Instability*
  • Heterochromatin / genetics
  • Heterochromatin / metabolism*
  • Histones / genetics
  • Histones / metabolism*
  • Male
  • Mice
  • Molecular Chaperones / genetics
  • Molecular Chaperones / metabolism
  • Polycomb Repressive Complex 1 / genetics
  • Polycomb Repressive Complex 1 / metabolism*
  • Small Ubiquitin-Related Modifier Proteins / genetics
  • Small Ubiquitin-Related Modifier Proteins / metabolism
  • Sumoylation*

Substances

  • Co-Repressor Proteins
  • Daxx protein, mouse
  • Heterochromatin
  • Histones
  • Molecular Chaperones
  • SUMO2 protein, mouse
  • Small Ubiquitin-Related Modifier Proteins
  • Polycomb Repressive Complex 1

Associated data

  • GEO/GSE137030
  • GEO/GSE133442
  • GEO/GSE107348