The role of FACT in managing chromatin: disruption, assembly, or repair?

Nucleic Acids Res. 2020 Dec 2;48(21):11929-11941. doi: 10.1093/nar/gkaa912.

Abstract

FACT (FAcilitates Chromatin Transcription) has long been considered to be a transcription elongation factor whose ability to destabilize nucleosomes promotes RNAPII progression on chromatin templates. However, this is just one function of this histone chaperone, as FACT also functions in DNA replication. While broadly conserved among eukaryotes and essential for viability in many organisms, dependence on FACT varies widely, with some differentiated cells proliferating normally in its absence. It is therefore unclear what the core functions of FACT are, whether they differ in different circumstances, and what makes FACT essential in some situations but not others. Here, we review recent advances and propose a unifying model for FACT activity. By analogy to DNA repair, we propose that the ability of FACT to both destabilize and assemble nucleosomes allows it to monitor and restore nucleosome integrity as part of a system of chromatin repair, in which disruptions in the packaging of DNA are sensed and returned to their normal state. The requirement for FACT then depends on the level of chromatin disruption occurring in the cell, and the cell's ability to tolerate packaging defects. The role of FACT in transcription would then be just one facet of a broader system for maintaining chromatin integrity.

Publication types

  • Research Support, N.I.H., Extramural
  • Review

MeSH terms

  • Binding Sites
  • Chromatin Assembly and Disassembly*
  • DNA / chemistry
  • DNA / genetics*
  • DNA / metabolism
  • DNA Damage
  • DNA Repair*
  • DNA Replication
  • DNA-Binding Proteins / chemistry
  • DNA-Binding Proteins / genetics*
  • DNA-Binding Proteins / metabolism
  • High Mobility Group Proteins / chemistry
  • High Mobility Group Proteins / genetics*
  • High Mobility Group Proteins / metabolism
  • Histone Chaperones / chemistry
  • Histone Chaperones / genetics*
  • Histone Chaperones / metabolism
  • Humans
  • Models, Molecular
  • Nucleosomes / chemistry
  • Nucleosomes / genetics*
  • Nucleosomes / metabolism
  • Organ Specificity
  • Protein Binding
  • Protein Conformation, alpha-Helical
  • Protein Conformation, beta-Strand
  • Protein Interaction Domains and Motifs
  • RNA Polymerase II / chemistry
  • RNA Polymerase II / genetics*
  • RNA Polymerase II / metabolism
  • Transcription, Genetic
  • Transcriptional Elongation Factors / chemistry
  • Transcriptional Elongation Factors / genetics*
  • Transcriptional Elongation Factors / metabolism

Substances

  • DNA-Binding Proteins
  • High Mobility Group Proteins
  • Histone Chaperones
  • Nucleosomes
  • SSRP1 protein, human
  • Transcriptional Elongation Factors
  • DNA
  • RNA Polymerase II