Draconibacterium halophilum sp. nov., A Halophilic Bacterium Isolated from Marine Sediment

Curr Microbiol. 2021 Jun;78(6):2440-2446. doi: 10.1007/s00284-021-02496-8. Epub 2021 Apr 27.

Abstract

A Gram-stain-negative, long-rod shaped, and facultatively anaerobic bacterium, designated as strain M1T, was isolated from the marine sediment of Jeju Island, South Korea. Strain M1T was found to be catalase- and oxidase-positive, light yellow-pigmented, non-motile, and non-flagellated, growing optimally at 30 °C, pH 7.0, and in the presence of 3% (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain M1T belongs to the genus Draconibacterium and is closely related to Draconibacterium orientale FH5T (97.2%), Draconibacterium sediminis JN14CK-3 T (96.5%), "Draconibacterium filum" F2T (96.5%) and Draconibacterium mangrovi GM2-18 T (96.3% sequence similarity). The values for digital DNA-DNA hybridization ranged from 37.6 to 38.3% against D. orientale FH5T, D. sediminis KN14CK-3 T, and D. mangrovi GM2-18 T, clearly indicating that strain M1T represents a distinct species of the genus Draconibacterium. Strain M1T has a 40.0% G + C content estimated by genome sequence, menaquinone 7 as the sole respiratory quinone, C15:0 anteiso and C15:0 iso as the major fatty acids, and phosphatidylethanolamine, an unidentified phospholipid, and unidentified lipids as the polar lipids. Based on the polyphasic characteristics, it is suggested that strain M1T be assigned to the genus Draconibacterium as the type strain of a novel species, for which the name Draconibacterium halophilum sp. nov. is proposed. The type strain is M1T (= KCTC 72809 T = VTCC 910107 T).

MeSH terms

  • Bacterial Typing Techniques
  • Bacteroidetes
  • Base Composition
  • DNA, Bacterial / genetics
  • Fatty Acids* / analysis
  • Geologic Sediments*
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Republic of Korea
  • Sequence Analysis, DNA
  • Vitamin K 2

Substances

  • DNA, Bacterial
  • Fatty Acids
  • RNA, Ribosomal, 16S
  • Vitamin K 2

Supplementary concepts

  • Draconibacterium orientale
  • Draconibacterium sediminis