Cell Energy Budget Platform for Multiparametric Assessment of Cell and Tissue Metabolism

Methods Mol Biol. 2021:2276:305-324. doi: 10.1007/978-1-0716-1266-8_23.

Abstract

Specific bioenergetic signature reports on the current metabolic state of the cell, which may be affected by metabolic rearrangement, dysfunction or dysregulation of relevant signaling pathways, altered physiological condition or energy stress. A combined analysis of respiration , glycolytic flux, Krebs cycle activity, ATP levels, and total biomass allows informative initial assessment. Such simple, high-throughput, multiparametric methodology, called cell energy budget (CEB ) platform, is presented here and demonstrated with particular cell and tissue models. The CEB uses a commercial fluorescent lanthanide probe pH-Xtra™ to measure extracellular acidification (ECA) associated with lactate (L-ECA) and combined lactate/CO2 (T-ECA), a phosphorescent probe MitoXpress®-Xtra to measure oxygen consumption rate (OCR), a bioluminescent ATP kit, and an absorbance-based total protein assay. All the assays are performed on a standard multi-label reader. Using the same readouts, the CEB approach can be extended to more detailed mechanistic studies, by targeting specific pathways in cell bioenergetics and measuring other cellular parameters, such as NAD(P)H, Ca2+, mitochondrial pH, membrane potential, redox state, with conventional fluorescent or luminescent probes.

Keywords: ATP assay; Bioenergetics; Cell energy budget; Cell metabolism; Extracellular acidification; Glycolysis; O2 and pH sensitive probes; Oxidative phosphorylation; Oxygen consumption rate; Respiration; Time-resolved fluorescence.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphate / metabolism*
  • Animals
  • Carbon Dioxide / metabolism*
  • Cells / metabolism*
  • Energy Metabolism
  • Extracellular Space / chemistry
  • Extracellular Space / metabolism
  • Fluorescent Dyes / chemistry
  • High-Throughput Screening Assays / methods*
  • Hydrogen-Ion Concentration
  • Lactic Acid / metabolism*
  • Oxygen Consumption / physiology
  • PC12 Cells
  • Rats

Substances

  • Fluorescent Dyes
  • Carbon Dioxide
  • Lactic Acid
  • Adenosine Triphosphate