Target of Rapamycin Complex 1 (TORC1), Protein Kinase A (PKA) and Cytosolic pH Regulate a Transcriptional Circuit for Lipid Droplet Formation

Int J Mol Sci. 2021 Aug 20;22(16):9017. doi: 10.3390/ijms22169017.

Abstract

Lipid droplets (LDs) are ubiquitous organelles that fulfill essential roles in response to metabolic cues. The identification of several neutral lipid synthesizing and regulatory protein complexes have propelled significant advance on the mechanisms of LD biogenesis in the endoplasmic reticulum (ER). However, our understanding of signaling networks, especially transcriptional mechanisms, regulating membrane biogenesis is very limited. Here, we show that the nutrient-sensing Target of Rapamycin Complex 1 (TORC1) regulates LD formation at a transcriptional level, by targeting DGA1 expression, in a Sit4-, Mks1-, and Sfp1-dependent manner. We show that cytosolic pH (pHc), co-regulated by the plasma membrane H+-ATPase Pma1 and the vacuolar ATPase (V-ATPase), acts as a second messenger, upstream of protein kinase A (PKA), to adjust the localization and activity of the major transcription factor repressor Opi1, which in turn controls the metabolic switch between phospholipid metabolism and lipid storage. Together, this work delineates hitherto unknown molecular mechanisms that couple nutrient availability and pHc to LD formation through a transcriptional circuit regulated by major signaling transduction pathways.

Keywords: cell signaling; lipid droplet; membrane biogenesis; nutrient; transcription.

MeSH terms

  • Cyclic AMP-Dependent Protein Kinases / metabolism*
  • Cyclic AMP-Dependent Protein Kinases / physiology
  • Cytosol / metabolism
  • Endoplasmic Reticulum / metabolism
  • Hydrogen-Ion Concentration
  • Lipid Droplets / metabolism*
  • Lipid Droplets / physiology
  • Lipid Metabolism / physiology
  • Mechanistic Target of Rapamycin Complex 1 / metabolism
  • Mechanistic Target of Rapamycin Complex 1 / physiology
  • Membrane Proteins / metabolism
  • Protein Phosphatase 2 / metabolism
  • Repressor Proteins / metabolism
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae Proteins / metabolism*
  • Saccharomyces cerevisiae Proteins / physiology
  • Signal Transduction
  • Transcription Factors / metabolism*
  • Transcription Factors / physiology

Substances

  • Membrane Proteins
  • OPI1 protein, S cerevisiae
  • Repressor Proteins
  • Saccharomyces cerevisiae Proteins
  • TORC1 protein complex, S cerevisiae
  • Transcription Factors
  • Mechanistic Target of Rapamycin Complex 1
  • Cyclic AMP-Dependent Protein Kinases
  • Protein Phosphatase 2
  • SIT4 protein, S cerevisiae