Cellular model system to dissect the isoform-selectivity of Akt inhibitors

Nat Commun. 2021 Sep 6;12(1):5297. doi: 10.1038/s41467-021-25512-8.

Abstract

The protein kinase Akt plays a pivotal role in cellular processes. However, its isoforms' distinct functions have not been resolved to date, mainly due to the lack of suitable biochemical and cellular tools. Against this background, we present the development of an isoform-dependent Ba/F3 model system to translate biochemical results on isoform specificity to the cellular level. Our cellular model system complemented by protein X-ray crystallography and structure-based ligand design results in covalent-allosteric Akt inhibitors with unique selectivity profiles. In a first proof-of-concept, the developed molecules allow studies on isoform-selective effects of Akt inhibition in cancer cells. Thus, this study will pave the way to resolve isoform-selective roles in health and disease and foster the development of next-generation therapeutics with superior on-target properties.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptor Proteins, Signal Transducing / genetics
  • Adaptor Proteins, Signal Transducing / metabolism
  • Allosteric Regulation
  • Allosteric Site
  • Animals
  • Antineoplastic Agents / chemical synthesis
  • Antineoplastic Agents / pharmacology*
  • Cell Line
  • Drug Design
  • Gene Expression
  • HEK293 Cells
  • Humans
  • Inhibitory Concentration 50
  • Lymphocytes / cytology
  • Lymphocytes / drug effects*
  • Lymphocytes / enzymology
  • Mice
  • Mitogen-Activated Protein Kinase 1 / genetics
  • Mitogen-Activated Protein Kinase 1 / metabolism
  • Mitogen-Activated Protein Kinase 3 / genetics
  • Mitogen-Activated Protein Kinase 3 / metabolism
  • Protein Kinase Inhibitors / chemical synthesis
  • Protein Kinase Inhibitors / pharmacology*
  • Proto-Oncogene Proteins c-akt / antagonists & inhibitors*
  • Proto-Oncogene Proteins c-akt / chemistry
  • Proto-Oncogene Proteins c-akt / genetics
  • Proto-Oncogene Proteins c-akt / metabolism
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Sf9 Cells
  • Small Molecule Libraries / chemical synthesis
  • Small Molecule Libraries / pharmacology*
  • Spodoptera
  • Structure-Activity Relationship

Substances

  • AKT1S1 protein, human
  • Adaptor Proteins, Signal Transducing
  • Antineoplastic Agents
  • Protein Kinase Inhibitors
  • Recombinant Proteins
  • Small Molecule Libraries
  • AKT1 protein, human
  • AKT2 protein, human
  • AKT3 protein, human
  • Proto-Oncogene Proteins c-akt
  • MAPK1 protein, human
  • MAPK3 protein, human
  • Mitogen-Activated Protein Kinase 1
  • Mitogen-Activated Protein Kinase 3