Transcriptional regulation of autophagy by RNA polymerase II

Autophagy. 2023 Jun;19(6):1867-1868. doi: 10.1080/15548627.2022.2138141. Epub 2022 Oct 27.

Abstract

Macroautophagy/autophagy is a catabolic recycling pathway and is tightly regulated by upstream signals. Autophagy genes are quickly upregulated upon stimuli such as nutrition limitation in response to the external environment. However, how the transcriptional activation of autophagy genes occurs is not well understood. We recently found that in yeast, the RNA polymerase II subunit Rpb9 specifically and efficiently upregulates the transcription of the autophagy gene ATG1 with the mediation of Gcn4. Such regulation was shown to be essential for autophagic activities induced by starvation. Furthermore, the function of Rpb9 in autophagy and the activation of ATG1 transcription is conserved in mammalian cells. In conclusion, Rpb9 specifically and positively regulates ATG1 transcription as a key regulator of autophagy.

Keywords: ATG1 gene; Gcn4; Rpb9; autophagy; starvation; transcription; yeast.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Autophagy / genetics
  • Gene Expression Regulation
  • Mammals / metabolism
  • RNA Polymerase II* / genetics
  • RNA Polymerase II* / metabolism
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae Proteins* / genetics
  • Saccharomyces cerevisiae Proteins* / metabolism

Substances

  • RNA Polymerase II
  • Rpb9 protein, S cerevisiae
  • Saccharomyces cerevisiae Proteins

Grants and funding

This work was supported by the National Key R&D Program of China under grant [2017YFA0506300] (to K.L.), the National Natural Science Foundation under grants [32022020] (to K.L.) and [31970693] (to K.L.) and the Disciplinary Excellence Development 135 program of West China Hospital under grant [ZYYC20015] (to K.L.)