Mitochondria-localized lncRNA HITT inhibits fusion by attenuating formation of mitofusin-2 homotypic or heterotypic complexes

J Biol Chem. 2023 Feb;299(2):102825. doi: 10.1016/j.jbc.2022.102825. Epub 2022 Dec 23.

Abstract

Long noncoding RNAs (lncRNAs) are emerging as essential players in multiple biological processes. Mitochondrial dynamics, comprising the continuous cycle of fission and fusion, are required for healthy mitochondria that function properly. Despite long-term recognition of its significance in cell-fate control, the mechanism underlying mitochondrial fusion is not completely understood, particularly regarding the involvement of lncRNAs. Here, we show that the lncRNA HITT (HIF-1α inhibitor at translation level) can specifically localize in mitochondria. Cells expressing higher levels of HITT contain fragmented mitochondria. Conversely, we show that HITT knockdown cells have more tubular mitochondria than is present in control cells. Mechanistically, we demonstrate HITT directly binds mitofusin-2 (MFN2), a core component that mediates mitochondrial outer membrane fusion, by the in vitro RNA pull-down and UV-cross-linking RNA-IP assays. In doing so, we found HITT disturbs MFN2 homotypic or heterotypic complex formation, attenuating mitochondrial fusion. Under stress conditions, such as ultraviolet radiation, we in addition show HITT stability increases as a consequence of MiR-205 downregulation, inhibiting MFN2-mediated fusion and leading to apoptosis. Overall, our data provide significant insights into the roles of organelle (mitochondria)-specific resident lncRNAs in regulating mitochondrial fusion and also reveal how such a mechanism controls cellular sensitivity to UV radiation-induced apoptosis.

Keywords: LINC00637; MFN2; apoptosis; mitochondrial dynamics; mitochondrial fusion.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Apoptosis / radiation effects
  • GTP Phosphohydrolases* / chemistry
  • GTP Phosphohydrolases* / metabolism
  • MicroRNAs / metabolism
  • Mitochondria* / genetics
  • Mitochondria* / metabolism
  • Mitochondria* / radiation effects
  • Mitochondrial Dynamics* / radiation effects
  • Mitochondrial Membranes / metabolism
  • Mitochondrial Proteins* / chemistry
  • Mitochondrial Proteins* / metabolism
  • Multiprotein Complexes* / chemistry
  • Multiprotein Complexes* / metabolism
  • RNA, Long Noncoding* / genetics
  • RNA, Long Noncoding* / metabolism
  • Ultraviolet Rays

Substances

  • GTP Phosphohydrolases
  • Mitochondrial Proteins
  • RNA, Long Noncoding
  • MicroRNAs
  • Multiprotein Complexes