Multitranscript analysis reveals an effect of 2-deoxy-d-glucose on gene expression linked to unfolded protein response and integrated stress response in primary human monocytes and monocyte-derived macrophages

Biochim Biophys Acta Gen Subj. 2023 Sep;1867(9):130397. doi: 10.1016/j.bbagen.2023.130397. Epub 2023 Jun 7.

Abstract

Background: Glycolytic inhibitor 2-deoxy-d-glucose (2-DG) binds to hexokinase in a non-competitive manner and phosphoglucose isomerase in a competitive manner, blocking the initial steps of the glycolytic pathway. Although 2-DG stimulates endoplasmic reticulum (ER) stress, activating the unfolded protein response to restore protein homeostasis, it is unclear which ER stress-related genes are modulated in response to 2-DG treatment in human primary cells. Here, we aimed to determine whether the treatment of monocytes and monocyte-derived macrophages (MDMs) with 2-DG leads to a transcriptional profile specific to ER stress.

Methods: We performed bioinformatics analysis to identify differentially expressed genes (DEGs) in previously reported RNA-seq datasets of 2-DG treated cells. RT-qPCR was performed to verify the sequencing data on cultured MDMs.

Results: A total of 95 common DEGs were found by transcriptional analysis of monocytes and MDMs treated with 2-DG. Among these, 74 were up-regulated and 21 were down-regulated. Multitranscript analysis showed that DEGs are linked to integrated stress response (GRP78/BiP, PERK, ATF4, CHOP, GADD34, IRE1α, XBP1, SESN2, ASNS, PHGDH), hexosamine biosynthetic pathway (GFAT1, GNA1, PGM3, UAP1), and mannose metabolism (GMPPA and GMPPB).

Conclusions: Results reveal that 2-DG triggers a gene expression program that might be involved in restoring protein homeostasis in primary cells.

General significance: 2-DG is known to inhibit glycolysis and induce ER stress; however, its effect on gene expression in primary cells is not well understood. This work shows that 2-DG is a stress inducer shifting the metabolic state of monocytes and macrophages.

Keywords: 2-deoxy-d-glucose; Endoplasmic reticulum stress; Human primary cells; Integrated stress response; Protein glycosylation; Unfolded protein response.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Deoxyglucose / metabolism
  • Deoxyglucose / pharmacology
  • Endoplasmic Reticulum Chaperone BiP
  • Endoribonucleases / metabolism
  • Gene Expression
  • Glucose* / metabolism
  • Humans
  • Macrophages / metabolism
  • Monocytes* / metabolism
  • Protein Serine-Threonine Kinases
  • Sestrins / metabolism
  • Unfolded Protein Response / genetics

Substances

  • Glucose
  • Endoribonucleases
  • Protein Serine-Threonine Kinases
  • Endoplasmic Reticulum Chaperone BiP
  • Deoxyglucose
  • SESN2 protein, human
  • Sestrins