Modulation of nucleotide metabolism by picornaviruses

PLoS Pathog. 2024 Mar 8;20(3):e1012036. doi: 10.1371/journal.ppat.1012036. eCollection 2024 Mar.

Abstract

Viruses actively reprogram the metabolism of the host to ensure the availability of sufficient building blocks for virus replication and spreading. However, relatively little is known about how picornaviruses-a large family of small, non-enveloped positive-strand RNA viruses-modulate cellular metabolism for their own benefit. Here, we studied the modulation of host metabolism by coxsackievirus B3 (CVB3), a member of the enterovirus genus, and encephalomyocarditis virus (EMCV), a member of the cardiovirus genus, using steady-state as well as 13C-glucose tracing metabolomics. We demonstrate that both CVB3 and EMCV increase the levels of pyrimidine and purine metabolites and provide evidence that this increase is mediated through degradation of nucleic acids and nucleotide recycling, rather than upregulation of de novo synthesis. Finally, by integrating our metabolomics data with a previously acquired phosphoproteomics dataset of CVB3-infected cells, we identify alterations in phosphorylation status of key enzymes involved in nucleotide metabolism, providing insight into the regulation of nucleotide metabolism during infection.

MeSH terms

  • Cardiovirus*
  • Encephalomyocarditis virus / physiology
  • Enterovirus B, Human / physiology
  • Enterovirus Infections*
  • Enterovirus* / physiology
  • HeLa Cells
  • Humans
  • Picornaviridae*
  • Virus Replication

Grants and funding

This project has received funding from the Innovative Medicines Initiative 2 Joint Undertaking (JU) under grant agreement n°101005077. The JU receives support from the European Union’s Horizon 2020 research and innovation programme, EFPIA and Bill and Melinda Gates Foundation, Global Health Drug Discovery Institute and University of Dundee. This funding was awarded to FJMvK. Link: https://cordis.europa.eu/project/id/101005077 The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.