Evolution of the nucleoprotein and matrix genes of wild-type strains of measles virus isolated from recent epidemics

Virology. 1994 Feb;198(2):724-30. doi: 10.1006/viro.1994.1086.

Abstract

To characterize the genetic properties of currently circulating strains of wild-type measles viruses, we constructed and sequenced cDNA clones of the nucleoprotein (N) and matrix (M) genes of wild-type strains isolated between 1958 and 1989. The N and M genes of wild-type isolates from the prevaccine era (before 1964) were highly related to each other and to the N and M genes of a currently used measles vaccine strain, Moraten. The N and M genes of these viruses differed by no more than 0.5% at the nucleotide level. In contrast, the N and M genes of wild-type viruses isolated between 1977 and 1989 showed genetic drift, with the greatest amount of drift occurring in the viruses isolated from recent cases in the United States. Overall, the M genes were slightly more conserved at the nucleotide level (2.6% nucleotide, 3.3% amino acid) than the N genes (4.8% nucleotide, 3.4% amino acid). Alignment of the predicted protein sequences of the N genes revealed two regions of amino acid heterogeneity. The evolutionary patterns for the N and M genes suggested that the wild-type viruses isolated in the United States in 1989 were more related to wild-type viruses isolated in the United Kingdom between 1983 and 1988 than to viruses isolated in the United States in 1983.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Biological Evolution
  • Capsid / genetics*
  • Disease Outbreaks
  • Genes, Viral / genetics*
  • Humans
  • Measles / epidemiology
  • Measles / genetics
  • Measles virus / genetics*
  • Measles virus / isolation & purification
  • Molecular Sequence Data
  • Sequence Analysis
  • Sequence Homology, Amino Acid
  • Viral Core Proteins / genetics*
  • Viral Matrix Proteins / genetics*
  • Viral Structural Proteins / genetics*

Substances

  • Viral Core Proteins
  • Viral Matrix Proteins
  • Viral Structural Proteins

Associated data

  • GENBANK/U01974
  • GENBANK/U01975
  • GENBANK/U01976
  • GENBANK/U01977
  • GENBANK/U01978
  • GENBANK/U01979
  • GENBANK/U01980
  • GENBANK/U01982
  • GENBANK/U01983
  • GENBANK/U01984
  • GENBANK/U01985
  • GENBANK/U01986
  • GENBANK/U01987
  • GENBANK/U01988
  • GENBANK/U01989
  • GENBANK/U0198I
  • GENBANK/U01990
  • GENBANK/U01991
  • GENBANK/U01992
  • GENBANK/U01993
  • GENBANK/U01994
  • GENBANK/U01995
  • GENBANK/U01996
  • GENBANK/U01997
  • GENBANK/U01998
  • GENBANK/U01999