Payam Dibaeinia[Author] - Search Results

Year	Number of Results
2016	1
2017	1
2018	1
2019	1
2020	1
2021	2
2022	2
2023	4
2024	1

1

FASTRAL: improving scalability of phylogenomic analysis.

Dibaeinia P, Tabe-Bordbar S, Warnow T. Dibaeinia P, et al. Bioinformatics. 2021 Aug 25;37(16):2317-2324. doi: 10.1093/bioinformatics/btab093. Bioinformatics. 2021. PMID: 33576396 Free PMC article.

2

Single-cell dissection of aggression in honeybee colonies.

Traniello IM, Bukhari SA, Dibaeinia P, Serrano G, Avalos A, Ahmed AC, Sankey AL, Hernaez M, Sinha S, Zhao SD, Catchen J, Robinson GE. Traniello IM, et al. Among authors: dibaeinia p. Nat Ecol Evol. 2023 Aug;7(8):1232-1244. doi: 10.1038/s41559-023-02090-0. Epub 2023 Jun 1. Nat Ecol Evol. 2023. PMID: 37264201

3

Influenza A virus infection disrupts oligodendrocyte homeostasis and alters the myelin lipidome in the adult mouse.

Louie AY, Kim JS, Drnevich J, Dibaeinia P, Koito H, Sinha S, McKim DB, Soto-Diaz K, Nowak RA, Das A, Steelman AJ. Louie AY, et al. Among authors: dibaeinia p. J Neuroinflammation. 2023 Aug 19;20(1):190. doi: 10.1186/s12974-023-02862-2. J Neuroinflammation. 2023. PMID: 37596606 Free PMC article.

4

CIMLA: Interpretable AI for inference of differential causal networks.

Dibaeinia P, Sinha S. Dibaeinia P, et al. ArXiv [Preprint]. 2023 Apr 25:arXiv:2304.12523v1. ArXiv. 2023. PMID: 37163135 Free PMC article. Preprint.

5

SERGIO: A Single-Cell Expression Simulator Guided by Gene Regulatory Networks.

Dibaeinia P, Sinha S. Dibaeinia P, et al. Cell Syst. 2020 Sep 23;11(3):252-271.e11. doi: 10.1016/j.cels.2020.08.003. Epub 2020 Aug 31. Cell Syst. 2020. PMID: 32871105 Free PMC article.

6

An epigenomic shift in amygdala marks the transition to maternal behaviors in alloparenting virgin female mice.

Seward CH, Saul MC, Troy JM, Dibaeinia P, Zhang H, Sinha S, Stubbs LJ. Seward CH, et al. Among authors: dibaeinia p. PLoS One. 2022 Feb 22;17(2):e0263632. doi: 10.1371/journal.pone.0263632. eCollection 2022. PLoS One. 2022. PMID: 35192674 Free PMC article.

7

The Liver X Receptor Is Selectively Modulated to Differentially Alter Female Mammary Metastasis-associated Myeloid Cells.

Ma L, Vidana Gamage HE, Tiwari S, Han C, Henn MA, Krawczynska N, Dibaeinia P, Koelwyn GJ, Das Gupta A, Bautista Rivas RO, Wright CL, Xu F, Moore KJ, Sinha S, Nelson ER. Ma L, et al. Among authors: dibaeinia p. Endocrinology. 2022 Jul 1;163(7):bqac072. doi: 10.1210/endocr/bqac072. Endocrinology. 2022. PMID: 35569056 Free PMC article.

8

Deciphering enhancer sequence using thermodynamics-based models and convolutional neural networks.

Dibaeinia P, Sinha S. Dibaeinia P, et al. Nucleic Acids Res. 2021 Oct 11;49(18):10309-10327. doi: 10.1093/nar/gkab765. Nucleic Acids Res. 2021. PMID: 34508359 Free PMC article.

9

DNA Origami-Graphene Hybrid Nanopore for DNA Detection.

Barati Farimani A, Dibaeinia P, Aluru NR. Barati Farimani A, et al. Among authors: dibaeinia p. ACS Appl Mater Interfaces. 2017 Jan 11;9(1):92-100. doi: 10.1021/acsami.6b11001. Epub 2016 Dec 22. ACS Appl Mater Interfaces. 2017. PMID: 28004567

10

A transcriptomic atlas of acute stress response to low pH in multiple Issatchenkia orientalis strains.

Dubinkina V, Bhogale S, Hsieh P-H, Dibaeinia P, Nambiar A, Maslov S, Yoshikuni Y, Sinha S. Dubinkina V, et al. Among authors: dibaeinia p. Microbiol Spectr. 2024 Jan 11;12(1):e0253623. doi: 10.1128/spectrum.02536-23. Epub 2023 Nov 29. Microbiol Spectr. 2024. PMID: 38018981 Free PMC article.

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