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CEDAR, an online resource for the reporting and exploration of complexome profiling data.
van Strien J, Haupt A, Schulte U, Braun HP, Cabrera-Orefice A, Choudhary JS, Evers F, Fernandez-Vizarra E, Guerrero-Castillo S, Kooij TWA, Páleníková P, Pardo M, Ugalde C, Wittig I, Wöhlbrand L, Brandt U, Arnold S, Huynen MA. van Strien J, et al. Among authors: palenikova p. Biochim Biophys Acta Bioenerg. 2021 Jul 1;1862(7):148411. doi: 10.1016/j.bbabio.2021.148411. Epub 2021 Mar 17. Biochim Biophys Acta Bioenerg. 2021. PMID: 33722514 Free article.
Predicting the mutations generated by repair of Cas9-induced double-strand breaks.
Allen F, Crepaldi L, Alsinet C, Strong AJ, Kleshchevnikov V, De Angeli P, Páleníková P, Khodak A, Kiselev V, Kosicki M, Bassett AR, Harding H, Galanty Y, Muñoz-Martínez F, Metzakopian E, Jackson SP, Parts L. Allen F, et al. Among authors: palenikova p. Nat Biotechnol. 2018 Nov 27:10.1038/nbt.4317. doi: 10.1038/nbt.4317. Online ahead of print. Nat Biotechnol. 2018. PMID: 30480667 Free PMC article.
Ms1 RNA increases the amount of RNA polymerase in Mycobacterium smegmatis.
Šiková M, Janoušková M, Ramaniuk O, Páleníková P, Pospíšil J, Bartl P, Suder A, Pajer P, Kubičková P, Pavliš O, Hradilová M, Vítovská D, Šanderová H, Převorovský M, Hnilicová J, Krásný L. Šiková M, et al. Among authors: palenikova p. Mol Microbiol. 2019 Feb;111(2):354-372. doi: 10.1111/mmi.14159. Epub 2018 Dec 11. Mol Microbiol. 2019. PMID: 30427073 Free article.
Quantitative density gradient analysis by mass spectrometry (qDGMS) and complexome profiling analysis (ComPrAn) R package for the study of macromolecular complexes.
Páleníková P, Harbour ME, Ding S, Fearnley IM, Van Haute L, Rorbach J, Scavetta R, Minczuk M, Rebelo-Guiomar P. Páleníková P, et al. Biochim Biophys Acta Bioenerg. 2021 Jun 1;1862(6):148399. doi: 10.1016/j.bbabio.2021.148399. Epub 2021 Feb 13. Biochim Biophys Acta Bioenerg. 2021. PMID: 33592209 Free PMC article.