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Year Number of Results
2008 1
2010 1
2012 2
2013 4
2014 3
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2018 1
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2020 2
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2022 4
2023 5
2024 2

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Page 1
Evaluating the Performance of the Astral Mass Analyzer for Quantitative Proteomics Using Data-Independent Acquisition.
Heil LR, Damoc E, Arrey TN, Pashkova A, Denisov E, Petzoldt J, Peterson AC, Hsu C, Searle BC, Shulman N, Riffle M, Connolly B, MacLean BX, Remes PM, Senko MW, Stewart HI, Hock C, Makarov AA, Hermanson D, Zabrouskov V, Wu CC, MacCoss MJ. Heil LR, et al. Among authors: shulman n. J Proteome Res. 2023 Oct 6;22(10):3290-3300. doi: 10.1021/acs.jproteome.3c00357. Epub 2023 Sep 8. J Proteome Res. 2023. PMID: 37683181 Free PMC article.
Targeted proteomics data interpretation with DeepMRM.
Park J, Wilkins C, Avtonomov D, Hong J, Back S, Kim H, Shulman N, MacLean BX, Lee SW, Kim S. Park J, et al. Among authors: shulman n. Cell Rep Methods. 2023 Jul 11;3(7):100521. doi: 10.1016/j.crmeth.2023.100521. eCollection 2023 Jul 24. Cell Rep Methods. 2023. PMID: 37533638 Free PMC article.
Cullin-independent recognition of HHARI substrates by a dynamic RBR catalytic domain.
Reiter KH, Zelter A, Janowska MK, Riffle M, Shulman N, MacLean BX, Tamura K, Chambers MC, MacCoss MJ, Davis TN, Guttman M, Brzovic PS, Klevit RE. Reiter KH, et al. Among authors: shulman n. Structure. 2022 Sep 1;30(9):1269-1284.e6. doi: 10.1016/j.str.2022.05.017. Epub 2022 Jun 17. Structure. 2022. PMID: 35716664 Free PMC article.
Avant-garde: an automated data-driven DIA data curation tool.
Vaca Jacome AS, Peckner R, Shulman N, Krug K, DeRuff KC, Officer A, Christianson KE, MacLean B, MacCoss MJ, Carr SA, Jaffe JD. Vaca Jacome AS, et al. Among authors: shulman n. Nat Methods. 2020 Dec;17(12):1237-1244. doi: 10.1038/s41592-020-00986-4. Epub 2020 Nov 16. Nat Methods. 2020. PMID: 33199889 Free PMC article.
Panorama: a targeted proteomics knowledge base.
Sharma V, Eckels J, Taylor GK, Shulman NJ, Stergachis AB, Joyner SA, Yan P, Whiteaker JR, Halusa GN, Schilling B, Gibson BW, Colangelo CM, Paulovich AG, Carr SA, Jaffe JD, MacCoss MJ, MacLean B. Sharma V, et al. Among authors: shulman nj. J Proteome Res. 2014 Sep 5;13(9):4205-10. doi: 10.1021/pr5006636. Epub 2014 Aug 18. J Proteome Res. 2014. PMID: 25102069 Free PMC article.
Audit logs to enforce document integrity in Skyline and Panorama.
Rohde T, Chupalov R, Shulman N, Sharma V, Eckels J, Pratt BS, MacCoss MJ, MacLean BX. Rohde T, et al. Among authors: shulman n. Bioinformatics. 2020 Aug 1;36(15):4366-4368. doi: 10.1093/bioinformatics/btaa547. Bioinformatics. 2020. PMID: 32467974 Free PMC article.
Evaluating the Performance of the Astral Mass Analyzer for Quantitative Proteomics Using Data Independent Acquisition.
Heil LR, Damoc E, Arrey TN, Pashkova A, Denisov E, Petzoldt J, Peterson AC, Hsu C, Searle BC, Shulman N, Riffle M, Connolly B, MacLean BX, Remes PM, Senko MW, Stewart HI, Hock C, Makarov AA, Hermanson D, Zabrouskov V, Wu CC, MacCoss MJ. Heil LR, et al. Among authors: shulman n. bioRxiv [Preprint]. 2023 Aug 7:2023.06.03.543570. doi: 10.1101/2023.06.03.543570. bioRxiv. 2023. Update in: J Proteome Res. 2023 Oct 6;22(10):3290-3300. doi: 10.1021/acs.jproteome.3c00357. PMID: 37398334 Free PMC article. Updated. Preprint.
A framework for installable external tools in Skyline.
Broudy D, Killeen T, Choi M, Shulman N, Mani DR, Abbatiello SE, Mani D, Ahmad R, Sahu AK, Schilling B, Tamura K, Boss Y, Sharma V, Gibson BW, Carr SA, Vitek O, MacCoss MJ, MacLean B. Broudy D, et al. Among authors: shulman n. Bioinformatics. 2014 Sep 1;30(17):2521-3. doi: 10.1093/bioinformatics/btu148. Epub 2014 May 9. Bioinformatics. 2014. PMID: 24813211 Free PMC article.
24 results