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Year | Number of Results |
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2023 | 6 |
2024 | 1 |
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SND1 binds SARS-CoV-2 negative-sense RNA and promotes viral RNA synthesis through NSP9.
Cell. 2023 Oct 26;186(22):4834-4850.e23. doi: 10.1016/j.cell.2023.09.002. Epub 2023 Oct 3.
Cell. 2023.
PMID: 37794589
Free PMC article.
RNA trafficking and subcellular localization-a review of mechanisms, experimental and predictive methodologies.
Wang J, Horlacher M, Cheng L, Winther O.
Wang J, et al. Among authors: horlacher m.
Brief Bioinform. 2023 Sep 20;24(5):bbad249. doi: 10.1093/bib/bbad249.
Brief Bioinform. 2023.
PMID: 37466130
Free PMC article.
Review.
Item in Clipboard
Transfer learning identifies sequence determinants of cell-type specific regulatory element accessibility.
Salvatore M, Horlacher M, Marsico A, Winther O, Andersson R.
Salvatore M, et al. Among authors: horlacher m.
NAR Genom Bioinform. 2023 Mar 29;5(2):lqad026. doi: 10.1093/nargab/lqad026. eCollection 2023 Jun.
NAR Genom Bioinform. 2023.
PMID: 37007588
Free PMC article.
Item in Clipboard
Towards in silico CLIP-seq: predicting protein-RNA interaction via sequence-to-signal learning.
Horlacher M, Wagner N, Moyon L, Kuret K, Goedert N, Salvatore M, Ule J, Gagneur J, Winther O, Marsico A.
Horlacher M, et al.
Genome Biol. 2023 Aug 4;24(1):180. doi: 10.1186/s13059-023-03015-7.
Genome Biol. 2023.
PMID: 37542318
Free PMC article.
Item in Clipboard
A systematic benchmark of machine learning methods for protein-RNA interaction prediction.
Horlacher M, Cantini G, Hesse J, Schinke P, Goedert N, Londhe S, Moyon L, Marsico A.
Horlacher M, et al.
Brief Bioinform. 2023 Sep 20;24(5):bbad307. doi: 10.1093/bib/bbad307.
Brief Bioinform. 2023.
PMID: 37635383
Free PMC article.
Item in Clipboard
A computational map of the human-SARS-CoV-2 protein-RNA interactome predicted at single-nucleotide resolution.
Horlacher M, Oleshko S, Hu Y, Ghanbari M, Cantini G, Schinke P, Vergara EE, Bittner F, Mueller NS, Ohler U, Moyon L, Marsico A.
Horlacher M, et al.
NAR Genom Bioinform. 2023 Feb 20;5(1):lqad010. doi: 10.1093/nargab/lqad010. eCollection 2023 Mar.
NAR Genom Bioinform. 2023.
PMID: 36814457
Free PMC article.
Item in Clipboard
DeepLocRNA: an interpretable deep learning model for predicting RNA subcellular localization with domain-specific transfer-learning.
Wang J, Horlacher M, Cheng L, Winther O.
Wang J, et al. Among authors: horlacher m.
Bioinformatics. 2024 Feb 1;40(2):btae065. doi: 10.1093/bioinformatics/btae065.
Bioinformatics. 2024.
PMID: 38317052
Free PMC article.
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