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Workflow enabling deepscale immunopeptidome, proteome, ubiquitylome, phosphoproteome, and acetylome analyses of sample-limited tissues.
Nat Commun. 2023 Apr 3;14(1):1851. doi: 10.1038/s41467-023-37547-0.
Nat Commun. 2023.
PMID: 37012232
Free PMC article.
Sensitive, High-Throughput HLA-I and HLA-II Immunopeptidomics Using Parallel Accumulation-Serial Fragmentation Mass Spectrometry.
Phulphagar KM, Ctortecka C, Jacome ASV, Klaeger S, Verzani EK, Hernandez GM, Udeshi ND, Clauser KR, Abelin JG, Carr SA.
Phulphagar KM, et al. Among authors: verzani ek.
Mol Cell Proteomics. 2023 Jun;22(6):100563. doi: 10.1016/j.mcpro.2023.100563. Epub 2023 May 3.
Mol Cell Proteomics. 2023.
PMID: 37142057
Free PMC article.
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Pan-viral ORFs discovery using Massively Parallel Ribosome Profiling.
Weingarten-Gabbay S, Bauer MR, Stanton AC, Klaeger S, Verzani EK, López D, Clauser KR, Carr SA, Abelin JG, Rice CM, Sabeti PC.
Weingarten-Gabbay S, et al. Among authors: verzani ek.
bioRxiv [Preprint]. 2023 Sep 28:2023.09.26.559641. doi: 10.1101/2023.09.26.559641.
bioRxiv. 2023.
PMID: 37808651
Free PMC article.
Preprint.
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Sensitive, high-throughput HLA-I and HLA-II immunopeptidomics using parallel accumulation-serial fragmentation mass spectrometry.
Phulphagar KM, Ctortecka C, Vaca Jacome AS, Klaeger S, Verzani EK, Hernandez GM, Udeshi N, Clauser K, Abelin J, Carr SA.
Phulphagar KM, et al. Among authors: verzani ek.
bioRxiv [Preprint]. 2023 Mar 18:2023.03.10.532106. doi: 10.1101/2023.03.10.532106.
bioRxiv. 2023.
PMID: 36993564
Free PMC article.
Updated.
Preprint.
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