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Year Number of Results
2012 1
2013 2
2014 1
2015 2
2016 1
2017 1
2018 1
2020 1
2021 3
2022 1
2023 1
2024 0

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15 results

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Page 1
A public-private partnership model for COVID-19 diagnostics.
Krijger PHL, Hoek TA, Boersma S, Donders LIPM, Broeders MMC, Pieterse M, Toonen PW, Logister I, Verhagen BMP, Verstegen MJAM, van Ravesteyn TW, Roymans RJTM, Mattiroli F, Vandesompele J, Nijhuis M, Meijer S, van Weert A, Dekker E, Dom FJ, Ruijtenbeek R, van der Velden LBJ, van de Bovenkamp JHB, Bosch M, de Laat W, Tanenbaum ME. Krijger PHL, et al. Among authors: verstegen mjam. Nat Biotechnol. 2021 Oct;39(10):1182-1184. doi: 10.1038/s41587-021-01080-6. Nat Biotechnol. 2021. PMID: 34584248 No abstract available.
Elevated enhancer-oncogene contacts and higher oncogene expression levels by recurrent CTCF inactivating mutations in acute T cell leukemia.
Smits WK, Vermeulen C, Hagelaar R, Kimura S, Vroegindeweij EM, Buijs-Gladdines JGCAM, van de Geer E, Verstegen MJAM, Splinter E, van Reijmersdal SV, Buijs A, Galjart N, van Eyndhoven W, van Min M, Kuiper R, Kemmeren P, Mullighan CG, de Laat W, Meijerink JPP. Smits WK, et al. Among authors: verstegen mjam. Cell Rep. 2023 Apr 25;42(4):112373. doi: 10.1016/j.celrep.2023.112373. Epub 2023 Apr 14. Cell Rep. 2023. PMID: 37060567 Free PMC article.
CTCF Binding Polarity Determines Chromatin Looping.
de Wit E, Vos ES, Holwerda SJ, Valdes-Quezada C, Verstegen MJ, Teunissen H, Splinter E, Wijchers PJ, Krijger PH, de Laat W. de Wit E, et al. Among authors: verstegen mj. Mol Cell. 2015 Nov 19;60(4):676-84. doi: 10.1016/j.molcel.2015.09.023. Epub 2015 Oct 29. Mol Cell. 2015. PMID: 26527277 Free article.
Sensitive Monogenic Noninvasive Prenatal Diagnosis by Targeted Haplotyping.
Vermeulen C, Geeven G, de Wit E, Verstegen MJAM, Jansen RPM, van Kranenburg M, de Bruijn E, Pulit SL, Kruisselbrink E, Shahsavari Z, Omrani D, Zeinali F, Najmabadi H, Katsila T, Vrettou C, Patrinos GP, Traeger-Synodinos J, Splinter E, Beekman JM, Kheradmand Kia S, Te Meerman GJ, Ploos van Amstel HK, de Laat W. Vermeulen C, et al. Among authors: verstegen mjam. Am J Hum Genet. 2017 Sep 7;101(3):326-339. doi: 10.1016/j.ajhg.2017.07.012. Epub 2017 Aug 24. Am J Hum Genet. 2017. PMID: 28844486 Free PMC article.
Enhancer hubs and loop collisions identified from single-allele topologies.
Allahyar A, Vermeulen C, Bouwman BAM, Krijger PHL, Verstegen MJAM, Geeven G, van Kranenburg M, Pieterse M, Straver R, Haarhuis JHI, Jalink K, Teunissen H, Renkens IJ, Kloosterman WP, Rowland BD, de Wit E, de Ridder J, de Laat W. Allahyar A, et al. Among authors: verstegen mjam. Nat Genet. 2018 Aug;50(8):1151-1160. doi: 10.1038/s41588-018-0161-5. Epub 2018 Jul 9. Nat Genet. 2018. PMID: 29988121
Robust detection of translocations in lymphoma FFPE samples using targeted locus capture-based sequencing.
Allahyar A, Pieterse M, Swennenhuis J, Los-de Vries GT, Yilmaz M, Leguit R, Meijers RWJ, van der Geize R, Vermaat J, Cleven A, van Wezel T, Diepstra A, van Kempen LC, Hijmering NJ, Stathi P, Sharma M, Melquiond ASJ, de Vree PJP, Verstegen MJAM, Krijger PHL, Hajo K, Simonis M, Rakszewska A, van Min M, de Jong D, Ylstra B, Feitsma H, Splinter E, de Laat W. Allahyar A, et al. Among authors: verstegen mjam. Nat Commun. 2021 Jun 7;12(1):3361. doi: 10.1038/s41467-021-23695-8. Nat Commun. 2021. PMID: 34099699 Free PMC article.
Multi-contact 4C: long-molecule sequencing of complex proximity ligation products to uncover local cooperative and competitive chromatin topologies.
Vermeulen C, Allahyar A, Bouwman BAM, Krijger PHL, Verstegen MJAM, Geeven G, Valdes-Quezada C, Renkens I, Straver R, Kloosterman WP, de Ridder J, de Laat W. Vermeulen C, et al. Among authors: verstegen mjam. Nat Protoc. 2020 Feb;15(2):364-397. doi: 10.1038/s41596-019-0242-7. Epub 2020 Jan 13. Nat Protoc. 2020. PMID: 31932773
Building regulatory landscapes reveals that an enhancer can recruit cohesin to create contact domains, engage CTCF sites and activate distant genes.
Rinzema NJ, Sofiadis K, Tjalsma SJD, Verstegen MJAM, Oz Y, Valdes-Quezada C, Felder AK, Filipovska T, van der Elst S, de Andrade Dos Ramos Z, Han R, Krijger PHL, de Laat W. Rinzema NJ, et al. Among authors: verstegen mjam. Nat Struct Mol Biol. 2022 Jun;29(6):563-574. doi: 10.1038/s41594-022-00787-7. Epub 2022 Jun 16. Nat Struct Mol Biol. 2022. PMID: 35710842 Free PMC article.
The pluripotent genome in three dimensions is shaped around pluripotency factors.
de Wit E, Bouwman BA, Zhu Y, Klous P, Splinter E, Verstegen MJ, Krijger PH, Festuccia N, Nora EP, Welling M, Heard E, Geijsen N, Poot RA, Chambers I, de Laat W. de Wit E, et al. Among authors: verstegen mj. Nature. 2013 Sep 12;501(7466):227-31. doi: 10.1038/nature12420. Epub 2013 Jul 24. Nature. 2013. PMID: 23883933
15 results