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Page 1
Single-cell profiling identifies myeloid cell subsets with distinct fates during neuroinflammation.
Science. 2019 Jan 25;363(6425):eaat7554. doi: 10.1126/science.aat7554.
Science. 2019.
PMID: 30679343
Microridge-like structures anchor motile cilia.
Yasunaga T, Wiegel J, Bergen MD, Helmstädter M, Epting D, Paolini A, Çiçek Ö, Radziwill G, Engel C, Brox T, Ronneberger O, Walentek P, Ulbrich MH, Walz G.
Yasunaga T, et al. Among authors: cicek o.
Nat Commun. 2022 Apr 19;13(1):2056. doi: 10.1038/s41467-022-29741-3.
Nat Commun. 2022.
PMID: 35440631
Free PMC article.
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Requirements for mammalian promoters to decode transcription factor dynamics.
Antwi EB, Marrakchi Y, Çiçek Ö, Brox T, Di Ventura B.
Antwi EB, et al. Among authors: cicek o.
Nucleic Acids Res. 2023 May 22;51(9):4674-4690. doi: 10.1093/nar/gkad273.
Nucleic Acids Res. 2023.
PMID: 37070176
Free PMC article.
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U-Net: deep learning for cell counting, detection, and morphometry.
Falk T, Mai D, Bensch R, Çiçek Ö, Abdulkadir A, Marrakchi Y, Böhm A, Deubner J, Jäckel Z, Seiwald K, Dovzhenko A, Tietz O, Dal Bosco C, Walsh S, Saltukoglu D, Tay TL, Prinz M, Palme K, Simons M, Diester I, Brox T, Ronneberger O.
Falk T, et al. Among authors: cicek o.
Nat Methods. 2019 Jan;16(1):67-70. doi: 10.1038/s41592-018-0261-2. Epub 2018 Dec 17.
Nat Methods. 2019.
PMID: 30559429
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Deep learning is widely applicable to phenotyping embryonic development and disease.
Naert T, Çiçek Ö, Ogar P, Bürgi M, Shaidani NI, Kaminski MM, Xu Y, Grand K, Vujanovic M, Prata D, Hildebrandt F, Brox T, Ronneberger O, Voigt FF, Helmchen F, Loffing J, Horb ME, Willsey HR, Lienkamp SS.
Naert T, et al. Among authors: cicek o.
Development. 2021 Nov 1;148(21):dev199664. doi: 10.1242/dev.199664. Epub 2021 Nov 5.
Development. 2021.
PMID: 34739029
Free PMC article.
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Author Correction: U-Net: deep learning for cell counting, detection, and morphometry.
Falk T, Mai D, Bensch R, Çiçek Ö, Abdulkadir A, Marrakchi Y, Böhm A, Deubner J, Jäckel Z, Seiwald K, Dovzhenko A, Tietz O, Bosco CD, Walsh S, Saltukoglu D, Tay TL, Prinz M, Palme K, Simons M, Diester I, Brox T, Ronneberger O.
Falk T, et al. Among authors: cicek o.
Nat Methods. 2019 Apr;16(4):351. doi: 10.1038/s41592-019-0356-4.
Nat Methods. 2019.
PMID: 30804552
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