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Structural variant identification and characterization.
Chromosome Res. 2020 Mar;28(1):31-47. doi: 10.1007/s10577-019-09623-z. Epub 2020 Jan 6.
Chromosome Res. 2020.
PMID: 31907725
Free PMC article.
Transposable element-mediated rearrangements are prevalent in human genomes.
Balachandran P, Walawalkar IA, Flores JI, Dayton JN, Audano PA, Beck CR.
Balachandran P, et al.
Nat Commun. 2022 Nov 19;13(1):7115. doi: 10.1038/s41467-022-34810-8.
Nat Commun. 2022.
PMID: 36402840
Free PMC article.
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Resolution of structural variation in diverse mouse genomes reveals chromatin remodeling due to transposable elements.
Ferraj A, Audano PA, Balachandran P, Czechanski A, Flores JI, Radecki AA, Mosur V, Gordon DS, Walawalkar IA, Eichler EE, Reinholdt LG, Beck CR.
Ferraj A, et al. Among authors: balachandran p.
Cell Genom. 2023 Apr 5;3(5):100291. doi: 10.1016/j.xgen.2023.100291. eCollection 2023 May 10.
Cell Genom. 2023.
PMID: 37228752
Free PMC article.
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SvAnna: efficient and accurate pathogenicity prediction of coding and regulatory structural variants in long-read genome sequencing.
Danis D, Jacobsen JOB, Balachandran P, Zhu Q, Yilmaz F, Reese J, Haimel M, Lyon GJ, Helbig I, Mungall CJ, Beck CR, Lee C, Smedley D, Robinson PN.
Danis D, et al. Among authors: balachandran p.
Genome Med. 2022 Apr 28;14(1):44. doi: 10.1186/s13073-022-01046-6.
Genome Med. 2022.
PMID: 35484572
Free PMC article.
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RNA-Guided Recombinase-Cas9 Fusion Targets Genomic DNA Deletion and Integration.
Standage-Beier K, Brookhouser N, Balachandran P, Zhang Q, Brafman DA, Wang X.
Standage-Beier K, et al. Among authors: balachandran p.
CRISPR J. 2019 Aug;2(4):209-222. doi: 10.1089/crispr.2019.0013.
CRISPR J. 2019.
PMID: 31436506
Free PMC article.
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