Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Results by year

Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1987 1
1989 1
1990 3
1991 1
1994 1
1996 1
1998 3
1999 2
2000 1
2001 4
2002 1
2003 1
2004 2
2005 1
2007 1
2008 1
2009 2
2010 1
2011 3
2012 4
2013 1
2014 1
2015 1
2016 1
2018 18
2019 3
2020 1
2021 1
2023 2
2024 0

Text availability

Article attribute

Article type

Publication date

Search Results

62 results

Results by year

Filters applied: . Clear all
Page 1
Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer.
Chan JM, Quintanal-Villalonga Á, Gao VR, Xie Y, Allaj V, Chaudhary O, Masilionis I, Egger J, Chow A, Walle T, Mattar M, Yarlagadda DVK, Wang JL, Uddin F, Offin M, Ciampricotti M, Qeriqi B, Bahr A, de Stanchina E, Bhanot UK, Lai WV, Bott MJ, Jones DR, Ruiz A, Baine MK, Li Y, Rekhtman N, Poirier JT, Nawy T, Sen T, Mazutis L, Hollmann TJ, Pe'er D, Rudin CM. Chan JM, et al. Among authors: nawy t. Cancer Cell. 2021 Nov 8;39(11):1479-1496.e18. doi: 10.1016/j.ccell.2021.09.008. Epub 2021 Oct 14. Cancer Cell. 2021. PMID: 34653364 Free PMC article.
SCLC exhibits greater immune sequestration and less immune infiltration than lung adenocarcinoma, and SCLC-N shows less immune infiltrate and greater T cell dysfunction than SCLC-A. We identify a profibrotic, immunosuppressive monocyte/macrophage population in SCLC tumors …
SCLC exhibits greater immune sequestration and less immune infiltration than lung adenocarcinoma, and SCLC-N shows less immune infiltrate an …
The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution.
Rozenblatt-Rosen O, Regev A, Oberdoerffer P, Nawy T, Hupalowska A, Rood JE, Ashenberg O, Cerami E, Coffey RJ, Demir E, Ding L, Esplin ED, Ford JM, Goecks J, Ghosh S, Gray JW, Guinney J, Hanlon SE, Hughes SK, Hwang ES, Iacobuzio-Donahue CA, Jané-Valbuena J, Johnson BE, Lau KS, Lively T, Mazzilli SA, Pe'er D, Santagata S, Shalek AK, Schapiro D, Snyder MP, Sorger PK, Spira AE, Srivastava S, Tan K, West RB, Williams EH; Human Tumor Atlas Network. Rozenblatt-Rosen O, et al. Among authors: nawy t. Cell. 2020 Apr 16;181(2):236-249. doi: 10.1016/j.cell.2020.03.053. Cell. 2020. PMID: 32302568 Free PMC article. Review.
SEACells infers transcriptional and epigenomic cellular states from single-cell genomics data.
Persad S, Choo ZN, Dien C, Sohail N, Masilionis I, Chaligné R, Nawy T, Brown CC, Sharma R, Pe'er I, Setty M, Pe'er D. Persad S, et al. Among authors: nawy t. Nat Biotechnol. 2023 Dec;41(12):1746-1757. doi: 10.1038/s41587-023-01716-9. Epub 2023 Mar 27. Nat Biotechnol. 2023. PMID: 36973557 Free PMC article.
We use our metacells to reveal expression dynamics and gradual reconfiguration of the chromatin landscape during hematopoietic differentiation and to uniquely identify CD4 T cell differentiation and activation states associated with disease onset and severity in a Coronavi …
We use our metacells to reveal expression dynamics and gradual reconfiguration of the chromatin landscape during hematopoietic differentiati …
A pan-cancer atlas.
Nawy T. Nawy T. Nat Methods. 2018 Jun;15(6):407. doi: 10.1038/s41592-018-0020-4. Nat Methods. 2018. PMID: 29855579 No abstract available.
Sequence meets space.
Nawy T. Nawy T. Nat Methods. 2018 Dec;15(12):1000. doi: 10.1038/s41592-018-0243-4. Nat Methods. 2018. PMID: 30504867 No abstract available.
Tissue-specific oncogene screens.
Nawy T. Nawy T. Nat Methods. 2018 Jun;15(6):408. doi: 10.1038/s41592-018-0027-x. Nat Methods. 2018. PMID: 29855584 No abstract available.
Protein-based cell barcodes.
Nawy T. Nawy T. Nat Methods. 2018 Dec;15(12):1002. doi: 10.1038/s41592-018-0250-5. Nat Methods. 2018. PMID: 30504877 No abstract available.
Mechanistic microbiota models.
Nawy T. Nawy T. Nat Methods. 2018 Nov;15(11):860. doi: 10.1038/s41592-018-0202-0. Nat Methods. 2018. PMID: 30377351 No abstract available.
Supervised discovery of interpretable gene programs from single-cell data.
Kunes RZ, Walle T, Land M, Nawy T, Pe'er D. Kunes RZ, et al. Among authors: nawy t. Nat Biotechnol. 2023 Sep 21:10.1038/s41587-023-01940-3. doi: 10.1038/s41587-023-01940-3. Online ahead of print. Nat Biotechnol. 2023. PMID: 37735262
We show that Spectra outperforms existing approaches in challenging tumor immune contexts, as it finds factors that change under immune checkpoint therapy, disentangles the highly correlated features of CD8(+) T cell tumor reactivity and exhaustion, finds a program that ex …
We show that Spectra outperforms existing approaches in challenging tumor immune contexts, as it finds factors that change under immune chec …
Transcripts from a spliceosome.
Nawy T. Nawy T. Nat Methods. 2018 Jul;15(7):480. doi: 10.1038/s41592-018-0058-3. Nat Methods. 2018. PMID: 29967507 No abstract available.
62 results