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genomepy: genes and genomes at your fingertips.
Frölich S, van der Sande M, Schäfers T, van Heeringen SJ. Frölich S, et al. Bioinformatics. 2023 Mar 1;39(3):btad119. doi: 10.1093/bioinformatics/btad119. Bioinformatics. 2023. PMID: 36882164 Free PMC article.
Myeloid-derived suppressor cells and tolerogenic dendritic cells are distinctively induced by PI3K and Wnt signaling pathways.
van Wigcheren GF, Cuenca-Escalona J, Stelloo S, Brake J, Peeters E, Horrevorts SK, Frölich S, Ramos-Tomillero I, Wesseling-Rozendaal Y, van Herpen CML, van de Stolpe A, Vermeulen M, de Vries IJM, Figdor CG, Flórez-Grau G. van Wigcheren GF, et al. Among authors: frolich s. J Biol Chem. 2023 Nov;299(11):105276. doi: 10.1016/j.jbc.2023.105276. Epub 2023 Sep 20. J Biol Chem. 2023. PMID: 37739035 Free PMC article.
Seq2science: an end-to-end workflow for functional genomics analysis.
van der Sande M, Frölich S, Schäfers T, Smits JGA, Snabel RR, Rinzema S, van Heeringen SJ. van der Sande M, et al. Among authors: frolich s. PeerJ. 2023 Nov 15;11:e16380. doi: 10.7717/peerj.16380. eCollection 2023. PeerJ. 2023. PMID: 38025697 Free PMC article.
scANANSE gene regulatory network and motif analysis of single-cell clusters.
Smits JGA, Arts JA, Frölich S, Snabel RR, Heuts BMH, Martens JHA, van Heeringen SJ, Zhou H. Smits JGA, et al. Among authors: frolich s. F1000Res. 2023 Mar 6;12:243. doi: 10.12688/f1000research.130530.1. eCollection 2023. F1000Res. 2023. PMID: 38116584 Free PMC article.