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The use of gene clusters to infer functional coupling.
Overbeek R, Fonstein M, D'Souza M, Pusch GD, Maltsev N. Overbeek R, et al. Proc Natl Acad Sci U S A. 1999 Mar 16;96(6):2896-901. doi: 10.1073/pnas.96.6.2896. Proc Natl Acad Sci U S A. 1999. PMID: 10077608 Free PMC article.
Searching for patterns in genomic data.
Dsouza M, Larsen N, Overbeek R. Dsouza M, et al. Among authors: overbeek r. Trends Genet. 1997 Dec;13(12):497-8. doi: 10.1016/s0168-9525(97)01347-4. Trends Genet. 1997. PMID: 9433140 No abstract available.
The ERGO genome analysis and discovery system.
Overbeek R, Larsen N, Walunas T, D'Souza M, Pusch G, Selkov E Jr, Liolios K, Joukov V, Kaznadzey D, Anderson I, Bhattacharyya A, Burd H, Gardner W, Hanke P, Kapatral V, Mikhailova N, Vasieva O, Osterman A, Vonstein V, Fonstein M, Ivanova N, Kyrpides N. Overbeek R, et al. Nucleic Acids Res. 2003 Jan 1;31(1):164-71. doi: 10.1093/nar/gkg148. Nucleic Acids Res. 2003. PMID: 12519973 Free PMC article.
High-throughput comparison, functional annotation, and metabolic modeling of plant genomes using the PlantSEED resource.
Seaver SM, Gerdes S, Frelin O, Lerma-Ortiz C, Bradbury LM, Zallot R, Hasnain G, Niehaus TD, El Yacoubi B, Pasternak S, Olson R, Pusch G, Overbeek R, Stevens R, de Crécy-Lagard V, Ware D, Hanson AD, Henry CS. Seaver SM, et al. Among authors: overbeek r. Proc Natl Acad Sci U S A. 2014 Jul 1;111(26):9645-50. doi: 10.1073/pnas.1401329111. Epub 2014 Jun 9. Proc Natl Acad Sci U S A. 2014. PMID: 24927599 Free PMC article.
Representation of function: the next step.
Overbeek R, Larsen N, Smith W, Maltsev N, Selkov E. Overbeek R, et al. Gene. 1997 May 20;191(1):GC1-GC9. doi: 10.1016/s0378-1119(96)00854-2. Gene. 1997. PMID: 9210599 No abstract available.
91 results