Huynen MA - Search Results

1

Combinatorial gene regulation in Plasmodium falciparum.

van Noort V, Huynen MA. van Noort V, et al. Among authors: huynen ma. Trends Genet. 2006 Feb;22(2):73-8. doi: 10.1016/j.tig.2005.12.002. Epub 2005 Dec 27. Trends Genet. 2006. PMID: 16380193 Review.

2

Predicting gene function by conserved co-expression.

van Noort V, Snel B, Huynen MA. van Noort V, et al. Among authors: huynen ma. Trends Genet. 2003 May;19(5):238-42. doi: 10.1016/S0168-9525(03)00056-8. Trends Genet. 2003. PMID: 12711213 Review.

3

The yeast coexpression network has a small-world, scale-free architecture and can be explained by a simple model.

van Noort V, Snel B, Huynen MA. van Noort V, et al. Among authors: huynen ma. EMBO Rep. 2004 Mar;5(3):280-4. doi: 10.1038/sj.embor.7400090. Epub 2004 Feb 13. EMBO Rep. 2004. PMID: 14968131 Free PMC article.

4

Comparative genomics for reliable protein-function prediction from genomic data.

Huynen MA, Snel B, van Noort V. Huynen MA, et al. Trends Genet. 2004 Aug;20(8):340-4. doi: 10.1016/j.tig.2004.06.003. Trends Genet. 2004. PMID: 15262404

5

Gene co-regulation is highly conserved in the evolution of eukaryotes and prokaryotes.

Snel B, van Noort V, Huynen MA. Snel B, et al. Among authors: huynen ma. Nucleic Acids Res. 2004 Sep 7;32(16):4725-31. doi: 10.1093/nar/gkh815. Print 2004. Nucleic Acids Res. 2004. PMID: 15353560 Free PMC article.

6

Correlation between sequence conservation and the genomic context after gene duplication.

Notebaart RA, Huynen MA, Teusink B, Siezen RJ, Snel B. Notebaart RA, et al. Among authors: huynen ma. Nucleic Acids Res. 2005 Oct 27;33(19):6164-71. doi: 10.1093/nar/gki913. Print 2005. Nucleic Acids Res. 2005. PMID: 16257980 Free PMC article.

7

Assessment of phylogenomic and orthology approaches for phylogenetic inference.

Dutilh BE, van Noort V, van der Heijden RT, Boekhout T, Snel B, Huynen MA. Dutilh BE, et al. Among authors: huynen ma. Bioinformatics. 2007 Apr 1;23(7):815-24. doi: 10.1093/bioinformatics/btm015. Epub 2007 Jan 19. Bioinformatics. 2007. PMID: 17237036

8

Orthology prediction at scalable resolution by phylogenetic tree analysis.

van der Heijden RT, Snel B, van Noort V, Huynen MA. van der Heijden RT, et al. Among authors: huynen ma. BMC Bioinformatics. 2007 Mar 8;8:83. doi: 10.1186/1471-2105-8-83. BMC Bioinformatics. 2007. PMID: 17346331 Free PMC article.

9

Practical and theoretical advances in predicting the function of a protein by its phylogenetic distribution.

Kensche PR, van Noort V, Dutilh BE, Huynen MA. Kensche PR, et al. Among authors: huynen ma. J R Soc Interface. 2008 Feb 6;5(19):151-70. doi: 10.1098/rsif.2007.1047. J R Soc Interface. 2008. PMID: 17535793 Free PMC article. Review.

10

Exploration of the omics evidence landscape: adding qualitative labels to predicted protein-protein interactions.

van Noort V, Snel B, Huynen MA. van Noort V, et al. Among authors: huynen ma. Genome Biol. 2007;8(9):R197. doi: 10.1186/gb-2007-8-9-r197. Genome Biol. 2007. PMID: 17880677 Free PMC article.

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