de Groot MJ - Search Results

1

Selection and characterisation of a xylitol-derepressed Aspergillus niger mutant that is apparently impaired in xylitol transport.

van de Vondervoort PJ, de Groot MJ, Ruijter GJ, Visser J. van de Vondervoort PJ, et al. Among authors: de groot mj. Appl Microbiol Biotechnol. 2006 Dec;73(4):881-6. doi: 10.1007/s00253-006-0527-y. Epub 2006 Aug 25. Appl Microbiol Biotechnol. 2006. PMID: 16932954

2

Isolation and characterization of two specific regulatory Aspergillus niger mutants shows antagonistic regulation of arabinan and xylan metabolism.

de Groot MJL, van de Vondervoort PJI, de Vries RP, vanKuyk PA, Ruijter GJG, Visser J. de Groot MJL, et al. Microbiology (Reading). 2003 May;149(Pt 5):1183-1191. doi: 10.1099/mic.0.25993-0. Microbiology (Reading). 2003. PMID: 12724380 Free article.

3

Metabolic control analysis of Aspergillus niger L-arabinose catabolism.

de Groot MJ, Prathumpai W, Visser J, Ruijter GJ. de Groot MJ, et al. Biotechnol Prog. 2005 Nov-Dec;21(6):1610-6. doi: 10.1021/bp050189o. Biotechnol Prog. 2005. PMID: 16321042

4

The Aspergillus niger D-xylulose kinase gene is co-expressed with genes encoding arabinan degrading enzymes, and is essential for growth on D-xylose and L-arabinose.

vanKuyk PA, de Groot MJ, Ruijter GJ, de Vries RP, Visser J. vanKuyk PA, et al. Among authors: de groot mj, de vries rp. Eur J Biochem. 2001 Oct;268(20):5414-23. doi: 10.1046/j.0014-2956.2001.02482.x. Eur J Biochem. 2001. PMID: 11606204 Free article.

5

Metabolic control analysis of xylose catabolism in Aspergillus.

Prathumpai W, Gabelgaard JB, Wanchanthuek P, van de Vondervoort PJ, de Groot MJ, McIntyre M, Nielsen J. Prathumpai W, et al. Among authors: de groot mj. Biotechnol Prog. 2003 Jul-Aug;19(4):1136-41. doi: 10.1021/bp034020r. Biotechnol Prog. 2003. PMID: 12892473

6

Quantitative proteomics and transcriptomics of anaerobic and aerobic yeast cultures reveals post-transcriptional regulation of key cellular processes.

de Groot MJL, Daran-Lapujade P, van Breukelen B, Knijnenburg TA, de Hulster EAF, Reinders MJT, Pronk JT, Heck AJR, Slijper M. de Groot MJL, et al. Microbiology (Reading). 2007 Nov;153(Pt 11):3864-3878. doi: 10.1099/mic.0.2007/009969-0. Microbiology (Reading). 2007. PMID: 17975095 Free article.

7

A three-way proteomics strategy allows differential analysis of yeast mitochondrial membrane protein complexes under anaerobic and aerobic conditions.

Helbig AO, de Groot MJ, van Gestel RA, Mohammed S, de Hulster EA, Luttik MA, Daran-Lapujade P, Pronk JT, Heck AJ, Slijper M. Helbig AO, et al. Among authors: de hulster ea, de groot mj. Proteomics. 2009 Oct;9(20):4787-98. doi: 10.1002/pmic.200800951. Proteomics. 2009. PMID: 19750512

8

The fluxes through glycolytic enzymes in Saccharomyces cerevisiae are predominantly regulated at posttranscriptional levels.

Daran-Lapujade P, Rossell S, van Gulik WM, Luttik MA, de Groot MJ, Slijper M, Heck AJ, Daran JM, de Winde JH, Westerhoff HV, Pronk JT, Bakker BM. Daran-Lapujade P, et al. Among authors: de groot mj, de winde jh. Proc Natl Acad Sci U S A. 2007 Oct 2;104(40):15753-8. doi: 10.1073/pnas.0707476104. Epub 2007 Sep 26. Proc Natl Acad Sci U S A. 2007. PMID: 17898166 Free PMC article.

9

Metabolic pathway alignment between species using a comprehensive and flexible similarity measure.

Li Y, de Ridder D, de Groot MJ, Reinders MJ. Li Y, et al. Among authors: de ridder d, de groot mj. BMC Syst Biol. 2008 Dec 24;2:111. doi: 10.1186/1752-0509-2-111. BMC Syst Biol. 2008. PMID: 19108747 Free PMC article.

10

Metabolite and reaction inference based on enzyme specificities.

de Groot MJ, van Berlo RJ, van Winden WA, Verheijen PJ, Reinders MJ, de Ridder D. de Groot MJ, et al. Among authors: de ridder d. Bioinformatics. 2009 Nov 15;25(22):2975-82. doi: 10.1093/bioinformatics/btp507. Epub 2009 Aug 20. Bioinformatics. 2009. PMID: 19696044 Free PMC article.

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