Bushel PR - Search Results

1

Dissecting the fission yeast regulatory network reveals phase-specific control elements of its cell cycle.

Bushel PR, Heard NA, Gutman R, Liu L, Peddada SD, Pyne S. Bushel PR, et al. BMC Syst Biol. 2009 Sep 16;3:93. doi: 10.1186/1752-0509-3-93. BMC Syst Biol. 2009. PMID: 19758441 Free PMC article.

2

Simultaneous clustering of gene expression data with clinical chemistry and pathological evaluations reveals phenotypic prototypes.

Bushel PR, Wolfinger RD, Gibson G. Bushel PR, et al. BMC Syst Biol. 2007 Feb 23;1:15. doi: 10.1186/1752-0509-1-15. BMC Syst Biol. 2007. PMID: 17408499 Free PMC article.

3

Extracting gene expression patterns and identifying co-expressed genes from microarray data reveals biologically responsive processes.

Chou JW, Zhou T, Kaufmann WK, Paules RS, Bushel PR. Chou JW, et al. Among authors: bushel pr. BMC Bioinformatics. 2007 Nov 2;8:427. doi: 10.1186/1471-2105-8-427. BMC Bioinformatics. 2007. PMID: 17980031 Free PMC article.

4

Huang L, Heinloth AN, Zeng ZB, Paules RS, Bushel PR. Huang L, et al. Among authors: bushel pr. BMC Genomics. 2008 Jun 16;9:288. doi: 10.1186/1471-2164-9-288. BMC Genomics. 2008. PMID: 18558008 Free PMC article.

5

Discernment of possible mechanisms of hepatotoxicity via biological processes over-represented by co-expressed genes.

Chou JW, Bushel PR. Chou JW, et al. Among authors: bushel pr. BMC Genomics. 2009 Jun 18;10:272. doi: 10.1186/1471-2164-10-272. BMC Genomics. 2009. PMID: 19538742 Free PMC article.

6

Principal component analysis-based filtering improves detection for Affymetrix gene expression arrays.

Lu J, Kerns RT, Peddada SD, Bushel PR. Lu J, et al. Among authors: bushel pr. Nucleic Acids Res. 2011 Jul;39(13):e86. doi: 10.1093/nar/gkr241. Epub 2011 Apr 27. Nucleic Acids Res. 2011. PMID: 21525126 Free PMC article.

7

Global gene profiling of spontaneous hepatocellular carcinoma in B6C3F1 mice: similarities in the molecular landscape with human liver cancer.

Hoenerhoff MJ, Pandiri AR, Lahousse SA, Hong HH, Ton TV, Masinde T, Auerbach SS, Gerrish K, Bushel PR, Shockley KR, Peddada SD, Sills RC. Hoenerhoff MJ, et al. Among authors: bushel pr. Toxicol Pathol. 2011 Jun;39(4):678-99. doi: 10.1177/0192623311407213. Epub 2011 May 13. Toxicol Pathol. 2011. PMID: 21571946 Free PMC article.

8

Research resource: whole-genome estrogen receptor α binding in mouse uterine tissue revealed by ChIP-seq.

Hewitt SC, Li L, Grimm SA, Chen Y, Liu L, Li Y, Bushel PR, Fargo D, Korach KS. Hewitt SC, et al. Among authors: bushel pr. Mol Endocrinol. 2012 May;26(5):887-98. doi: 10.1210/me.2011-1311. Epub 2012 Mar 22. Mol Endocrinol. 2012. PMID: 22446102 Free PMC article.

9

Population differences in transcript-regulator expression quantitative trait loci.

Bushel PR, McGovern R, Liu L, Hofmann O, Huda A, Lu J, Hide W, Lin X. Bushel PR, et al. PLoS One. 2012;7(3):e34286. doi: 10.1371/journal.pone.0034286. Epub 2012 Mar 27. PLoS One. 2012. PMID: 22479588 Free PMC article.

10

Differential transcriptomic analysis of spontaneous lung tumors in B6C3F1 mice: comparison to human non-small cell lung cancer.

Pandiri AR, Sills RC, Ziglioli V, Ton TV, Hong HH, Lahousse SA, Gerrish KE, Auerbach SS, Shockley KR, Bushel PR, Peddada SD, Hoenerhoff MJ. Pandiri AR, et al. Among authors: bushel pr. Toxicol Pathol. 2012 Dec;40(8):1141-59. doi: 10.1177/0192623312447543. Epub 2012 Jun 11. Toxicol Pathol. 2012. PMID: 22688403 Free PMC article.

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