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Illuminate the Functions of Dark Proteins Using the Reactome-IDG Web Portal.
Beavers D, Brunson T, Sanati N, Matthews L, Haw R, Shorser S, Sevilla C, Viteri G, Conley P, Rothfels K, Hermjakob H, Stein L, D'Eustachio P, Wu G. Beavers D, et al. Among authors: viteri g. Curr Protoc. 2023 Jul;3(7):e845. doi: 10.1002/cpz1.845. Curr Protoc. 2023. PMID: 37467006
Illuminating Dark Proteins using Reactome Pathways.
Brunson T, Sanati N, Matthews L, Haw R, Beavers D, Shorser S, Sevilla C, Viteri G, Conley P, Rothfels K, Hermjakob H, Stein L, D'Eustachio P, Wu G. Brunson T, et al. Among authors: viteri g. bioRxiv [Preprint]. 2023 Jun 5:2023.06.05.543335. doi: 10.1101/2023.06.05.543335. bioRxiv. 2023. PMID: 37333417 Free PMC article. Preprint.
The reactome pathway knowledgebase 2022.
Gillespie M, Jassal B, Stephan R, Milacic M, Rothfels K, Senff-Ribeiro A, Griss J, Sevilla C, Matthews L, Gong C, Deng C, Varusai T, Ragueneau E, Haider Y, May B, Shamovsky V, Weiser J, Brunson T, Sanati N, Beckman L, Shao X, Fabregat A, Sidiropoulos K, Murillo J, Viteri G, Cook J, Shorser S, Bader G, Demir E, Sander C, Haw R, Wu G, Stein L, Hermjakob H, D'Eustachio P. Gillespie M, et al. Among authors: viteri g. Nucleic Acids Res. 2022 Jan 7;50(D1):D687-D692. doi: 10.1093/nar/gkab1028. Nucleic Acids Res. 2022. PMID: 34788843 Free PMC article.
ReactomeGSA - Efficient Multi-Omics Comparative Pathway Analysis.
Griss J, Viteri G, Sidiropoulos K, Nguyen V, Fabregat A, Hermjakob H. Griss J, et al. Among authors: viteri g. Mol Cell Proteomics. 2020 Dec;19(12):2115-2125. doi: 10.1074/mcp.TIR120.002155. Epub 2020 Sep 9. Mol Cell Proteomics. 2020. PMID: 32907876 Free PMC article.
Reactome and ORCID-fine-grained credit attribution for community curation.
Viteri G, Matthews L, Varusai T, Gillespie M, Milacic M, Cook J, Weiser J, Shorser S, Sidiropoulos K, Fabregat A, Haw R, Wu G, Stein L, D'Eustachio P, Hermjakob H. Viteri G, et al. Database (Oxford). 2019 Jan 1;2019:baz123. doi: 10.1093/database/baz123. Database (Oxford). 2019. PMID: 31802127 Free PMC article.
The reactome pathway knowledgebase.
Jassal B, Matthews L, Viteri G, Gong C, Lorente P, Fabregat A, Sidiropoulos K, Cook J, Gillespie M, Haw R, Loney F, May B, Milacic M, Rothfels K, Sevilla C, Shamovsky V, Shorser S, Varusai T, Weiser J, Wu G, Stein L, Hermjakob H, D'Eustachio P. Jassal B, et al. Among authors: viteri g. Nucleic Acids Res. 2020 Jan 8;48(D1):D498-D503. doi: 10.1093/nar/gkz1031. Nucleic Acids Res. 2020. PMID: 31691815 Free PMC article.
Reactome graph database: Efficient access to complex pathway data.
Fabregat A, Korninger F, Viteri G, Sidiropoulos K, Marin-Garcia P, Ping P, Wu G, Stein L, D'Eustachio P, Hermjakob H. Fabregat A, et al. Among authors: viteri g. PLoS Comput Biol. 2018 Jan 29;14(1):e1005968. doi: 10.1371/journal.pcbi.1005968. eCollection 2018 Jan. PLoS Comput Biol. 2018. PMID: 29377902 Free PMC article.
20 results