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Whole-genome DNA methylation profiling using MethylCap-seq.
Brinkman AB, Simmer F, Ma K, Kaan A, Zhu J, Stunnenberg HG. Brinkman AB, et al. Among authors: simmer f. Methods. 2010 Nov;52(3):232-6. doi: 10.1016/j.ymeth.2010.06.012. Epub 2010 Jun 11. Methods. 2010. PMID: 20542119
Quantitative comparison of genome-wide DNA methylation mapping technologies.
Bock C, Tomazou EM, Brinkman AB, Müller F, Simmer F, Gu H, Jäger N, Gnirke A, Stunnenberg HG, Meissner A. Bock C, et al. Among authors: simmer f. Nat Biotechnol. 2010 Oct;28(10):1106-14. doi: 10.1038/nbt.1681. Epub 2010 Sep 19. Nat Biotechnol. 2010. PMID: 20852634 Free PMC article.
Epigenetic targeting in pancreatic cancer.
van Kampen JG, Marijnissen-van Zanten MA, Simmer F, van der Graaf WT, Ligtenberg MJ, Nagtegaal ID. van Kampen JG, et al. Among authors: simmer f. Cancer Treat Rev. 2014 Jun;40(5):656-64. doi: 10.1016/j.ctrv.2013.12.002. Epub 2014 Jan 3. Cancer Treat Rev. 2014. PMID: 24433955 Review.
Regulation of DNA methylation patterns by CK2-mediated phosphorylation of Dnmt3a.
Deplus R, Blanchon L, Rajavelu A, Boukaba A, Defrance M, Luciani J, Rothé F, Dedeurwaerder S, Denis H, Brinkman AB, Simmer F, Müller F, Bertin B, Berdasco M, Putmans P, Calonne E, Litchfield DW, de Launoit Y, Jurkowski TP, Stunnenberg HG, Bock C, Sotiriou C, Fraga MF, Esteller M, Jeltsch A, Fuks F. Deplus R, et al. Among authors: simmer f. Cell Rep. 2014 Aug 7;8(3):743-53. doi: 10.1016/j.celrep.2014.06.048. Epub 2014 Jul 24. Cell Rep. 2014. PMID: 25066127 Free article.
Partially methylated domains are hypervariable in breast cancer and fuel widespread CpG island hypermethylation.
Brinkman AB, Nik-Zainal S, Simmer F, Rodríguez-González FG, Smid M, Alexandrov LB, Butler A, Martin S, Davies H, Glodzik D, Zou X, Ramakrishna M, Staaf J, Ringnér M, Sieuwerts A, Ferrari A, Morganella S, Fleischer T, Kristensen V, Gut M, van de Vijver MJ, Børresen-Dale AL, Richardson AL, Thomas G, Gut IG, Martens JWM, Foekens JA, Stratton MR, Stunnenberg HG. Brinkman AB, et al. Among authors: simmer f. Nat Commun. 2019 Apr 15;10(1):1749. doi: 10.1038/s41467-019-09828-0. Nat Commun. 2019. PMID: 30988298 Free PMC article.
48 results