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Although divergent in residues of the peptide binding site, conserved chimpanzee Patr-AL and polymorphic human HLA-A*02 have overlapping peptide-binding repertoires.
Gleimer M, Wahl AR, Hickman HD, Abi-Rached L, Norman PJ, Guethlein LA, Hammond JA, Draghi M, Adams EJ, Juo S, Jalili R, Gharizadeh B, Ronaghi M, Garcia KC, Hildebrand WH, Parham P. Gleimer M, et al. Among authors: jalili r. J Immunol. 2011 Feb 1;186(3):1575-88. doi: 10.4049/jimmunol.1002990. Epub 2011 Jan 5. J Immunol. 2011. PMID: 21209280 Free PMC article.
Whole-genome sequencing of the efficient industrial fuel-ethanol fermentative Saccharomyces cerevisiae strain CAT-1.
Babrzadeh F, Jalili R, Wang C, Shokralla S, Pierce S, Robinson-Mosher A, Nyren P, Shafer RW, Basso LC, de Amorim HV, de Oliveira AJ, Davis RW, Ronaghi M, Gharizadeh B, Stambuk BU. Babrzadeh F, et al. Among authors: jalili r. Mol Genet Genomics. 2012 Jun;287(6):485-94. doi: 10.1007/s00438-012-0695-7. Epub 2012 May 6. Mol Genet Genomics. 2012. PMID: 22562254
Six RNA viruses and forty-one hosts: viral small RNAs and modulation of small RNA repertoires in vertebrate and invertebrate systems.
Parameswaran P, Sklan E, Wilkins C, Burgon T, Samuel MA, Lu R, Ansel KM, Heissmeyer V, Einav S, Jackson W, Doukas T, Paranjape S, Polacek C, dos Santos FB, Jalili R, Babrzadeh F, Gharizadeh B, Grimm D, Kay M, Koike S, Sarnow P, Ronaghi M, Ding SW, Harris E, Chow M, Diamond MS, Kirkegaard K, Glenn JS, Fire AZ. Parameswaran P, et al. Among authors: jalili r. PLoS Pathog. 2010 Feb 12;6(2):e1000764. doi: 10.1371/journal.ppat.1000764. PLoS Pathog. 2010. PMID: 20169186 Free PMC article.
Bacterial flora-typing with targeted, chip-based Pyrosequencing.
Sundquist A, Bigdeli S, Jalili R, Druzin ML, Waller S, Pullen KM, El-Sayed YY, Taslimi MM, Batzoglou S, Ronaghi M. Sundquist A, et al. Among authors: jalili r. BMC Microbiol. 2007 Nov 30;7:108. doi: 10.1186/1471-2180-7-108. BMC Microbiol. 2007. PMID: 18047683 Free PMC article.
High throughput automated allele frequency estimation by pyrosequencing.
Doostzadeh J, Shokralla S, Absalan F, Jalili R, Mohandessi S, Langston JW, Davis RW, Ronaghi M, Gharizadeh B. Doostzadeh J, et al. Among authors: jalili r. PLoS One. 2008 Jul 16;3(7):e2693. doi: 10.1371/journal.pone.0002693. PLoS One. 2008. PMID: 18628978 Free PMC article.
Droplet-based pyrosequencing using digital microfluidics.
Boles DJ, Benton JL, Siew GJ, Levy MH, Thwar PK, Sandahl MA, Rouse JL, Perkins LC, Sudarsan AP, Jalili R, Pamula VK, Srinivasan V, Fair RB, Griffin PB, Eckhardt AE, Pollack MG. Boles DJ, et al. Among authors: jalili r. Anal Chem. 2011 Nov 15;83(22):8439-47. doi: 10.1021/ac201416j. Epub 2011 Oct 14. Anal Chem. 2011. PMID: 21932784 Free PMC article.
110 results