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Molecular Signatures for the PVC Clade (Planctomycetes, Verrucomicrobia, Chlamydiae, and Lentisphaerae) of Bacteria Provide Insights into Their Evolutionary Relationships.
Front Microbiol. 2012 Sep 17;3:327. doi: 10.3389/fmicb.2012.00327. eCollection 2012.
Front Microbiol. 2012.
PMID: 23060863
Free PMC article.
Protein based molecular markers provide reliable means to understand prokaryotic phylogeny and support Darwinian mode of evolution.
Bhandari V, Naushad HS, Gupta RS.
Bhandari V, et al. Among authors: naushad hs.
Front Cell Infect Microbiol. 2012 Jul 26;2:98. doi: 10.3389/fcimb.2012.00098. eCollection 2012.
Front Cell Infect Microbiol. 2012.
PMID: 22919687
Free PMC article.
Review.
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Conserved signature indels and signature proteins as novel tools for understanding microbial phylogeny and systematics: identification of molecular signatures that are specific for the phytopathogenic genera Dickeya, Pectobacterium and Brenneria.
Naushad HS, Lee B, Gupta RS.
Naushad HS, et al.
Int J Syst Evol Microbiol. 2014 Feb;64(Pt 2):366-383. doi: 10.1099/ijs.0.054213-0.
Int J Syst Evol Microbiol. 2014.
PMID: 24505075
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Molecular signatures (conserved indels) in protein sequences that are specific for the order Pasteurellales and distinguish two of its main clades.
Naushad HS, Gupta RS.
Naushad HS, et al.
Antonie Van Leeuwenhoek. 2012 Jan;101(1):105-24. doi: 10.1007/s10482-011-9628-4. Epub 2011 Aug 10.
Antonie Van Leeuwenhoek. 2012.
PMID: 21830122
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Phylogenomics and molecular signatures for species from the plant pathogen-containing order xanthomonadales.
Naushad HS, Gupta RS.
Naushad HS, et al.
PLoS One. 2013;8(2):e55216. doi: 10.1371/journal.pone.0055216. Epub 2013 Feb 8.
PLoS One. 2013.
PMID: 23408961
Free PMC article.
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