Araki H - Search Results

1

Vasohibin-1 is identified as a master-regulator of endothelial cell apoptosis using gene network analysis.

Affara M, Sanders D, Araki H, Tamada Y, Dunmore BJ, Humphreys S, Imoto S, Savoie C, Miyano S, Kuhara S, Jeffries D, Print C, Charnock-Jones DS. Affara M, et al. Among authors: araki h. BMC Genomics. 2013 Jan 16;14:23. doi: 10.1186/1471-2164-14-23. BMC Genomics. 2013. PMID: 23324451 Free PMC article.

2

Understanding endothelial cell apoptosis: what can the transcriptome, glycome and proteome reveal?

Affara M, Dunmore B, Savoie C, Imoto S, Tamada Y, Araki H, Charnock-Jones DS, Miyano S, Print C. Affara M, et al. Among authors: araki h. Philos Trans R Soc Lond B Biol Sci. 2007 Aug 29;362(1484):1469-87. doi: 10.1098/rstb.2007.2129. Philos Trans R Soc Lond B Biol Sci. 2007. PMID: 17569639 Free PMC article. Review.

3

Analysis of PPARalpha-dependent and PPARalpha-independent transcript regulation following fenofibrate treatment of human endothelial cells.

Araki H, Tamada Y, Imoto S, Dunmore B, Sanders D, Humphrey S, Nagasaki M, Doi A, Nakanishi Y, Yasuda K, Tomiyasu Y, Tashiro K, Print C, Charnock-Jones DS, Kuhara S, Miyano S. Araki H, et al. Angiogenesis. 2009;12(3):221-9. doi: 10.1007/s10456-009-9142-8. Epub 2009 Apr 9. Angiogenesis. 2009. PMID: 19357976

4

Estimating genome-wide gene networks using nonparametric Bayesian network models on massively parallel computers.

Tamada Y, Imoto S, Araki H, Nagasaki M, Print C, Charnock-Jones DS, Miyano S. Tamada Y, et al. Among authors: araki h. IEEE/ACM Trans Comput Biol Bioinform. 2011 May-Jun;8(3):683-97. doi: 10.1109/TCBB.2010.68. IEEE/ACM Trans Comput Biol Bioinform. 2011. PMID: 20714027

5

Gene network inference and visualization tools for biologists: application to new human transcriptome datasets.

Hurley D, Araki H, Tamada Y, Dunmore B, Sanders D, Humphreys S, Affara M, Imoto S, Yasuda K, Tomiyasu Y, Tashiro K, Savoie C, Cho V, Smith S, Kuhara S, Miyano S, Charnock-Jones DS, Crampin EJ, Print CG. Hurley D, et al. Among authors: araki h. Nucleic Acids Res. 2012 Mar;40(6):2377-98. doi: 10.1093/nar/gkr902. Epub 2011 Nov 24. Nucleic Acids Res. 2012. PMID: 22121215 Free PMC article.

6

Cell cycle gene networks are associated with melanoma prognosis.

Wang L, Hurley DG, Watkins W, Araki H, Tamada Y, Muthukaruppan A, Ranjard L, Derkac E, Imoto S, Miyano S, Crampin EJ, Print CG. Wang L, et al. Among authors: araki h. PLoS One. 2012;7(4):e34247. doi: 10.1371/journal.pone.0034247. Epub 2012 Apr 20. PLoS One. 2012. PMID: 22536322 Free PMC article.

7

Computational gene network analysis reveals TNF-induced angiogenesis.

Ogami K, Yamaguchi R, Imoto S, Tamada Y, Araki H, Print C, Miyano S. Ogami K, et al. Among authors: araki h. BMC Syst Biol. 2012;6 Suppl 2(Suppl 2):S12. doi: 10.1186/1752-0509-6-S2-S12. Epub 2012 Dec 12. BMC Syst Biol. 2012. PMID: 23281897 Free PMC article.

8

Computational strategy for discovering druggable gene networks from genome-wide RNA expression profiles.

Imoto S, Tamada Y, Araki H, Yasuda K, Print CG, Charnock-Jones SD, Sanders D, Savoie CJ, Tashiro K, Kuhara S, Miyano S. Imoto S, et al. Among authors: araki h. Pac Symp Biocomput. 2006:559-71. Pac Symp Biocomput. 2006. PMID: 17094269 Free article.

9

The transcriptional targets of mutant FOXL2 in granulosa cell tumours.

Rosario R, Araki H, Print CG, Shelling AN. Rosario R, et al. Among authors: araki h. PLoS One. 2012;7(9):e46270. doi: 10.1371/journal.pone.0046270. Epub 2012 Sep 28. PLoS One. 2012. PMID: 23029457 Free PMC article.

10

Unraveling dynamic activities of autocrine pathways that control drug-response transcriptome networks.

Tamada Y, Araki H, Imoto S, Nagasaki M, Doi A, Nakanishi Y, Tomiyasu Y, Yasuda K, Dunmore B, Sanders D, Humphreys S, Print C, Charnock-Jones DS, Tashiro K, Kuhara S, Miyano S. Tamada Y, et al. Among authors: araki h. Pac Symp Biocomput. 2009:251-63. Pac Symp Biocomput. 2009. PMID: 19209706 Free article.

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