Bais P - Search Results

1

CloudNeo: a cloud pipeline for identifying patient-specific tumor neoantigens.

Bais P, Namburi S, Gatti DM, Zhang X, Chuang JH. Bais P, et al. Bioinformatics. 2017 Oct 1;33(19):3110-3112. doi: 10.1093/bioinformatics/btx375. Bioinformatics. 2017. PMID: 28605406 Free PMC article.

2

Mutations in DNA repair genes are associated with increased neo-antigen load and activated T cell infiltration in lung adenocarcinoma.

Chae YK, Anker JF, Bais P, Namburi S, Giles FJ, Chuang JH. Chae YK, et al. Among authors: bais p. Oncotarget. 2017 Dec 15;9(8):7949-7960. doi: 10.18632/oncotarget.23742. eCollection 2018 Jan 30. Oncotarget. 2017. PMID: 29487705 Free PMC article.

3

Mutations in DNA repair genes are associated with increased neoantigen burden and a distinct immunophenotype in lung squamous cell carcinoma.

Chae YK, Anker JF, Oh MS, Bais P, Namburi S, Agte S, Giles FJ, Chuang JH. Chae YK, et al. Among authors: bais p. Sci Rep. 2019 Mar 1;9(1):3235. doi: 10.1038/s41598-019-39594-4. Sci Rep. 2019. PMID: 30824826 Free PMC article.

4

CRISPR/Cas9 interrogation of the mouse Pcdhg gene cluster reveals a crucial isoform-specific role for Pcdhgc4.

Garrett AM, Bosch PJ, Steffen DM, Fuller LC, Marcucci CG, Koch AA, Bais P, Weiner JA, Burgess RW. Garrett AM, et al. Among authors: bais p. PLoS Genet. 2019 Dec 26;15(12):e1008554. doi: 10.1371/journal.pgen.1008554. eCollection 2019 Dec. PLoS Genet. 2019. PMID: 31877124 Free PMC article.

5

p53-mediated neurodegeneration in the absence of the nuclear protein Akirin2.

Peek SL, Bosch PJ, Bahl E, Iverson BJ, Parida M, Bais P, Manak JR, Michaelson JJ, Burgess RW, Weiner JA. Peek SL, et al. Among authors: bais p. iScience. 2022 Jan 25;25(2):103814. doi: 10.1016/j.isci.2022.103814. eCollection 2022 Feb 18. iScience. 2022. PMID: 35198879 Free PMC article.

6

Mouse models of NADK2 deficiency analyzed for metabolic and gene expression changes to elucidate pathophysiology.

Murray GC, Bais P, Hatton CL, Tadenev ALD, Hoffmann BR, Stodola TJ, Morelli KH, Pratt SL, Schroeder D, Doty R, Fiehn O, John SWM, Bult CJ, Cox GA, Burgess RW. Murray GC, et al. Among authors: bais p. Hum Mol Genet. 2022 Nov 28;31(23):4055-4074. doi: 10.1093/hmg/ddac151. Hum Mol Genet. 2022. PMID: 35796562 Free PMC article.

7

Metabolite profile of a mouse model of Charcot-Marie-Tooth type 2D neuropathy: implications for disease mechanisms and interventions.

Bais P, Beebe K, Morelli KH, Currie ME, Norberg SN, Evsikov AV, Miers KE, Seburn KL, Guergueltcheva V, Kremensky I, Jordanova A, Bult CJ, Burgess RW. Bais P, et al. Biol Open. 2016 Jul 15;5(7):908-20. doi: 10.1242/bio.019273. Biol Open. 2016. PMID: 27288508 Free PMC article.

8

The integrated stress response contributes to tRNA synthetase-associated peripheral neuropathy.

Spaulding EL, Hines TJ, Bais P, Tadenev ALD, Schneider R, Jewett D, Pattavina B, Pratt SL, Morelli KH, Stum MG, Hill DP, Gobet C, Pipis M, Reilly MM, Jennings MJ, Horvath R, Bai Y, Shy ME, Alvarez-Castelao B, Schuman EM, Bogdanik LP, Storkebaum E, Burgess RW. Spaulding EL, et al. Among authors: bais p. Science. 2021 Sep 3;373(6559):1156-1161. doi: 10.1126/science.abb3414. Epub 2021 Sep 1. Science. 2021. PMID: 34516839 Free PMC article.

9

Metabolomics as a tool for discovery of biomarkers of autism spectrum disorder in the blood plasma of children.

West PR, Amaral DG, Bais P, Smith AM, Egnash LA, Ross ME, Palmer JA, Fontaine BR, Conard KR, Corbett BA, Cezar GG, Donley EL, Burrier RE. West PR, et al. Among authors: bais p. PLoS One. 2014 Nov 7;9(11):e112445. doi: 10.1371/journal.pone.0112445. eCollection 2014. PLoS One. 2014. PMID: 25380056 Free PMC article.

10

Large scale enzyme based xenobiotic identification for exposomics.

Liu KH, Lee CM, Singer G, Bais P, Castellanos F, Woodworth MH, Ziegler TR, Kraft CS, Miller GW, Li S, Go YM, Morgan ET, Jones DP. Liu KH, et al. Among authors: bais p. Nat Commun. 2021 Sep 14;12(1):5418. doi: 10.1038/s41467-021-25698-x. Nat Commun. 2021. PMID: 34521839 Free PMC article.

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