Rocha EPC - Search Results

1

A widespread family of polymorphic toxins encoded by temperate phages.

Jamet A, Touchon M, Ribeiro-Gonçalves B, Carriço JA, Charbit A, Nassif X, Ramirez M, Rocha EPC. Jamet A, et al. Among authors: rocha epc. BMC Biol. 2017 Aug 29;15(1):75. doi: 10.1186/s12915-017-0415-1. BMC Biol. 2017. PMID: 28851366 Free PMC article.

2

Similar compositional biases are caused by very different mutational effects.

Rocha EP, Touchon M, Feil EJ. Rocha EP, et al. Genome Res. 2006 Dec;16(12):1537-47. doi: 10.1101/gr.5525106. Epub 2006 Oct 26. Genome Res. 2006. PMID: 17068325 Free PMC article.

3

Causes of insertion sequences abundance in prokaryotic genomes.

Touchon M, Rocha EP. Touchon M, et al. Mol Biol Evol. 2007 Apr;24(4):969-81. doi: 10.1093/molbev/msm014. Epub 2007 Jan 23. Mol Biol Evol. 2007. PMID: 17251179

4

From GC skews to wavelets: a gentle guide to the analysis of compositional asymmetries in genomic data.

Touchon M, Rocha EP. Touchon M, et al. Biochimie. 2008 Apr;90(4):648-59. doi: 10.1016/j.biochi.2007.09.015. Epub 2007 Sep 29. Biochimie. 2008. PMID: 17988781 Review.

5

Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths.

Touchon M, Hoede C, Tenaillon O, Barbe V, Baeriswyl S, Bidet P, Bingen E, Bonacorsi S, Bouchier C, Bouvet O, Calteau A, Chiapello H, Clermont O, Cruveiller S, Danchin A, Diard M, Dossat C, Karoui ME, Frapy E, Garry L, Ghigo JM, Gilles AM, Johnson J, Le Bouguénec C, Lescat M, Mangenot S, Martinez-Jéhanne V, Matic I, Nassif X, Oztas S, Petit MA, Pichon C, Rouy Z, Ruf CS, Schneider D, Tourret J, Vacherie B, Vallenet D, Médigue C, Rocha EP, Denamur E. Touchon M, et al. PLoS Genet. 2009 Jan;5(1):e1000344. doi: 10.1371/journal.pgen.1000344. Epub 2009 Jan 23. PLoS Genet. 2009. PMID: 19165319 Free PMC article.

6

A module located at a chromosomal integration hot spot is responsible for the multidrug resistance of a reference strain from Escherichia coli clonal group A.

Lescat M, Calteau A, Hoede C, Barbe V, Touchon M, Rocha E, Tenaillon O, Médigue C, Johnson JR, Denamur E. Lescat M, et al. Antimicrob Agents Chemother. 2009 Jun;53(6):2283-8. doi: 10.1128/AAC.00123-09. Epub 2009 Apr 13. Antimicrob Agents Chemother. 2009. PMID: 19364861 Free PMC article.

7

Genesis, effects and fates of repeats in prokaryotic genomes.

Treangen TJ, Abraham AL, Touchon M, Rocha EP. Treangen TJ, et al. FEMS Microbiol Rev. 2009 May;33(3):539-71. doi: 10.1111/j.1574-6976.2009.00169.x. FEMS Microbiol Rev. 2009. PMID: 19396957 Free article. Review.

8

Horizontal gene transfer of the secretome drives the evolution of bacterial cooperation and virulence.

Nogueira T, Rankin DJ, Touchon M, Taddei F, Brown SP, Rocha EP. Nogueira T, et al. Curr Biol. 2009 Nov 3;19(20):1683-91. doi: 10.1016/j.cub.2009.08.056. Epub 2009 Oct 1. Curr Biol. 2009. PMID: 19800234 Free PMC article.

9

No evidence for elemental-based streamlining of prokaryotic genomes.

Vieira-Silva S, Touchon M, Rocha EP. Vieira-Silva S, et al. Trends Ecol Evol. 2010 Jun;25(6):319-20; author reply 320-1. doi: 10.1016/j.tree.2010.03.001. Epub 2010 Apr 8. Trends Ecol Evol. 2010. PMID: 20381897 No abstract available.

10

The small, slow and specialized CRISPR and anti-CRISPR of Escherichia and Salmonella.

Touchon M, Rocha EP. Touchon M, et al. PLoS One. 2010 Jun 15;5(6):e11126. doi: 10.1371/journal.pone.0011126. PLoS One. 2010. PMID: 20559554 Free PMC article.

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