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Structural basis for the assembly of the Ragulator-Rag GTPase complex.
Yonehara R, Nada S, Nakai T, Nakai M, Kitamura A, Ogawa A, Nakatsumi H, Nakayama KI, Li S, Standley DM, Yamashita E, Nakagawa A, Okada M. Yonehara R, et al. Among authors: standley dm. Nat Commun. 2017 Nov 20;8(1):1625. doi: 10.1038/s41467-017-01762-3. Nat Commun. 2017. PMID: 29158492 Free PMC article.
MAFFT-DASH: integrated protein sequence and structural alignment.
Rozewicki J, Li S, Amada KM, Standley DM, Katoh K. Rozewicki J, et al. Among authors: standley dm. Nucleic Acids Res. 2019 Jul 2;47(W1):W5-W10. doi: 10.1093/nar/gkz342. Nucleic Acids Res. 2019. PMID: 31062021 Free PMC article.
Structural Determinants of the APOBEC3G N-Terminal Domain for HIV-1 RNA Association.
Fukuda H, Li S, Sardo L, Smith JL, Yamashita K, Sarca AD, Shirakawa K, Standley DM, Takaori-Kondo A, Izumi T. Fukuda H, et al. Among authors: standley dm. Front Cell Infect Microbiol. 2019 May 21;9:129. doi: 10.3389/fcimb.2019.00129. eCollection 2019. Front Cell Infect Microbiol. 2019. PMID: 31165049 Free PMC article.
Structural Modeling of Lymphocyte Receptors and Their Antigens.
Li S, Wilamowski J, Teraguchi S, van Eerden FJ, Rozewicki J, Davila A, Xu Z, Katoh K, Standley DM. Li S, et al. Among authors: standley dm. Methods Mol Biol. 2019;2048:207-229. doi: 10.1007/978-1-4939-9728-2_17. Methods Mol Biol. 2019. PMID: 31396940
An infectivity-enhancing site on the SARS-CoV-2 spike protein targeted by antibodies.
Liu Y, Soh WT, Kishikawa JI, Hirose M, Nakayama EE, Li S, Sasai M, Suzuki T, Tada A, Arakawa A, Matsuoka S, Akamatsu K, Matsuda M, Ono C, Torii S, Kishida K, Jin H, Nakai W, Arase N, Nakagawa A, Matsumoto M, Nakazaki Y, Shindo Y, Kohyama M, Tomii K, Ohmura K, Ohshima S, Okamoto T, Yamamoto M, Nakagami H, Matsuura Y, Nakagawa A, Kato T, Okada M, Standley DM, Shioda T, Arase H. Liu Y, et al. Among authors: standley dm. Cell. 2021 Jun 24;184(13):3452-3466.e18. doi: 10.1016/j.cell.2021.05.032. Epub 2021 May 24. Cell. 2021. PMID: 34139176 Free PMC article.
Landscape of infection enhancing antibodies in COVID-19 and healthy donors.
Ismanto HS, Xu Z, Saputri DS, Wilamowski J, Li S, Nugraha DK, Horiguchi Y, Okada M, Arase H, Standley DM. Ismanto HS, et al. Among authors: standley dm. Comput Struct Biotechnol J. 2022;20:6033-6040. doi: 10.1016/j.csbj.2022.11.001. Epub 2022 Nov 4. Comput Struct Biotechnol J. 2022. PMID: 36348766 Free PMC article.
130 results